Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_E14
(981 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 33 0.31
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.41
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.41
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical p... 32 0.54
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 32 0.54
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 32 0.54
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.72
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 32 0.72
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.72
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.72
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.95
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.3
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.3
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.3
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.3
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.3
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 30 2.2
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 30 2.9
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 30 2.9
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 5.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.7
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 6.7
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 28 8.8
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 28 8.8
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 8.8
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 28 8.8
AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical... 28 8.8
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Frame = +2
Query: 713 PXPKXXP-PXXX*IXXTXRXPQILPNSLGESXGXXVPXPGP-PVXSPXPXXXPXXXPXPQ 886
P PK P P P+ PN E P P P P P P P P P+
Sbjct: 173 PEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPK 232
Query: 887 XNPGPXXPP 913
NP P P
Sbjct: 233 PNPNPKPEP 241
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = +1
Query: 757 YXPXPXNPPQFXGGIPXXXXPXSWSPRXLPXPXXXSXXRPXSXXKPGTTSAPXVLQKYPX 936
Y P P PP P +PR P P P PG T P + P
Sbjct: 260 YPPVPPPPPSVTPMPPPMPPTPGMTPRP-PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
Query: 937 PPXSPXKKPP 966
PP PP
Sbjct: 319 PPPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = +1
Query: 757 YXPXPXNPPQFXGGIPXXXXPXSWSPRXLPXPXXXSXXRPXSXXKPGTTSAPXVLQKYPX 936
Y P P PP P +PR P P P PG T P + P
Sbjct: 270 YPPVPPPPPSVTPMPPPMPPTPGMTPRP-PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
Query: 937 PPXSPXKKPP 966
PP PP
Sbjct: 329 PPPPSRFGPP 338
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PG-PPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
P G P PG PPV P P P PQ PGP PP
Sbjct: 116 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPP 161
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 776 ILPNSLGESXGXXVPXPGPPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
+ P + GE P P P +P P P P+ PGP PP
Sbjct: 215 LTPGAPGEPGDSGPPGPPGPPGAPG-NDGPPGPPGPKGAPGPDGPP 259
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 815 VPXPGPPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
VP P PP P P P P P+ P P P
Sbjct: 96 VPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEP 128
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +2
Query: 794 GESXGXXVPXPGPPVX-SPXPXXXPXXXPXPQXNPGPXXPP 913
G G P P PP P P P P PQ P P P
Sbjct: 90 GRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQP 130
>Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical
protein C16C10.11 protein.
Length = 154
Score = 32.3 bits (70), Expect = 0.54
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 VVRTWLGCPXPTIPXQHLPRLSXSXSXTAIADRPXRSSPALCXPXAPXVTGT--GSISLS 560
+VR P P+ P + PR + S A RP ++PA P AP G G+ S
Sbjct: 1 MVRRRTASPSPSAPVRSAPRPAAQSSFAAPPPRPAAAAPAYHPPAAPTPMGAPMGAPSQG 60
Query: 561 PXXLGXIRX*IGSV 602
P + + G V
Sbjct: 61 PGLMKQMAATAGGV 74
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PG-PPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
P G P PG PPV P P P PQ PGP PP
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPP 156
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 776 ILPNSLGESXGXXVPXPGPPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
+ P + GE P P P +P P P P+ PGP PP
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPG-NDGPPGPPGPKGAPGPDGPP 254
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PG-PPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
P G P PG PPV P P P PQ PGP PP
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPP 156
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 776 ILPNSLGESXGXXVPXPGPPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
+ P + GE P P P +P P P P+ PGP PP
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPG-NDGPPGPPGPKGAPGPDGPP 254
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.72
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPPXXS 922
P G+ +P PG P P P P P PQ PGP PP S
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPS 162
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 31.9 bits (69), Expect = 0.72
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPPXXS 922
P G+ +P PG P P P P P PQ PGP PP S
Sbjct: 81 PGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPS 129
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.72
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPPXXS 922
P G+ +P PG P P P P P PQ PGP PP S
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPS 162
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.72
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 940 GGXGTFGXRGGXXWSRVXLXXRXXXGXXXGGGGXXGG 830
GG G +G GG W R G GGGG GG
Sbjct: 44 GGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGG 80
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.95
Identities = 21/75 (28%), Positives = 28/75 (37%)
Frame = +1
Query: 742 PLNXXYXPXPXNPPQFXGGIPXXXXPXSWSPRXLPXPXXXSXXRPXSXXKPGTTSAPXVL 921
P++ P P PP G + P P P P RP PG P
Sbjct: 214 PVDPSEDPKPSEPPS-PGPVDPSDEPSPSDPPGPPGPPGPPTRRP-----PGPPGPPT-- 265
Query: 922 QKYPXPPXSPXKKPP 966
++ P PP P ++PP
Sbjct: 266 RRPPGPPGPPTRRPP 280
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +2
Query: 770 PQILPNSLGESXGXXVPXPGPPVXSPXPXXXPXXXPXPQ--XNPGPXXP 910
P + P+ + G P P P P P P P P +PGP P
Sbjct: 135 PSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSPGPVDP 183
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = +1
Query: 742 PLNXXYXPXPXNPPQFXGGIPXXXXPXSWSPRXLPXPXXXSXXRPXSXXKPGTTSAPXV- 918
P++ P P PP G + P P P P S P PG P
Sbjct: 197 PVDPSDEPSPSGPPS-PGPVDPSEDPKPSEPPS-PGPVDPSD-EPSPSDPPGPPGPPGPP 253
Query: 919 LQKYPXPPXSPXKKPP 966
++ P PP P ++PP
Sbjct: 254 TRRPPGPPGPPTRRPP 269
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
P G+ +P PG P P P P P PQ PGP PP
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPP 159
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 824 PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
PG P +P P P P PQ PGP PP
Sbjct: 133 PGKPPTAPCEPTTPPPCKPCPQGPPGPPGPP 163
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
P G+ +P PG P P P P P PQ PGP PP
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPP 159
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
P G+ +P PG P P P P P PQ PGP PP
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPP 159
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 824 PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
PG P +P P P P PQ PGP PP
Sbjct: 133 PGKPPTAPCEPTTPPPCKPCPQGPPGPPGPP 163
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +2
Query: 770 PQILPNSLGESXGXXVPXPGP-PVXSPXPXXXPXXXPXPQXNPGPXXPP 913
P P + +S P P P P P P P P P+ P P P
Sbjct: 150 PMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHKPKPFPKP 198
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 782 PNSLGESXGXXVPXPGP-PVXSPXPXXXPXXXPXPQXNPGPXXPP 913
P + +S P P P P P P P P P+ P P P
Sbjct: 18 PKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKP 62
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 831 PPXXPPPPXXXPXXXRXXXXTRDH---XXPPRXPKVPXPP 941
PP P PP P TRDH P P +P PP
Sbjct: 557 PPLPPLPPPAPPIVVHVLNYTRDHDHIVFVPLLPYIPPPP 596
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 183 DAIACFEQRQ*NSEGECYTFCHVYFIIIIQWSCIRRASC 67
DA AC + +G+C C + +++Q C+ R C
Sbjct: 406 DATACHACKNVYHKGKCIEKCDAHLYLLLQRRCVTREQC 444
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 183 DAIACFEQRQ*NSEGECYTFCHVYFIIIIQWSCIRRASC 67
DA AC + +G+C C + +++Q C+ R C
Sbjct: 403 DATACHACKNVYHKGKCIEKCDAHLYLLLQRRCVTREQC 441
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 824 PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
PG P P P P P P+ PGP PP
Sbjct: 119 PGRPPKEPCEPITPPPCKPCPEGPPGPAGPP 149
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 824 PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
PG P P P P P P+ PGP PP
Sbjct: 121 PGRPPKEPCEPLTPPPCKPCPEGPPGPAGPP 151
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 830 PPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
PP SP P P P PQ P P PP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRP-PRTPP 176
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 782 PNSLGESXGXXVPX-PGPPVXSPX-PXXXPXXXPXPQXNPGPXXPP 913
P G++ +P PG P P P P P PQ GP PP
Sbjct: 119 PGRPGKAGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPAGPPGPP 164
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 806 GXXVPXPGPPVXSPXPXXXPXXXPXPQXNPGP 901
G +P PGP P P P P+ NPGP
Sbjct: 246 GRLIPVPGPQGAPGKPG--PIGPPGPKGNPGP 275
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 806 GXXVPXPGPPVXSPXPXXXPXXXPXPQXNPGP 901
G +P PGP P P P P+ NPGP
Sbjct: 246 GRLIPVPGPQGAPGKPG--PIGPPGPKGNPGP 275
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 818 PXPGPPVXSPXPXXXPXXXPXPQXNPGPXXPP 913
P P PP P P P P P P P PP
Sbjct: 546 PTPPPPPREPTPRE-PTPEPEPVREPTPPPPP 576
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 842 SPXPXXXPXXXPXPQXNPGPXXPPXXSKS 928
SP P P P P P P PP S S
Sbjct: 159 SPDPKRAPRYSPPPSSTPTPTPPPSSSSS 187
>AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical
protein T01G6.10 protein.
Length = 275
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -2
Query: 170 VSNSASRTAKANATLFAMFIL*LLFSGRVSGVLRARSRPIHQILRIP 30
V+ S+S +A A LFA + + +GR +G L A + + ++++ P
Sbjct: 11 VTGSSSGIGRATAVLFAKYGAQVTITGRDAGKLEATKKKMLKVMKNP 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,391,853
Number of Sequences: 27780
Number of extensions: 279064
Number of successful extensions: 1496
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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