Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_E07
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79639-6|CAB01919.3|  957|Caenorhabditis elegans Hypothetical pr...    38   0.013
Z79639-5|CAD42645.2|  972|Caenorhabditis elegans Hypothetical pr...    38   0.013
Z79598-9|CAB01869.3|  957|Caenorhabditis elegans Hypothetical pr...    38   0.013
Z79598-8|CAD42646.2|  972|Caenorhabditis elegans Hypothetical pr...    38   0.013
AF519110-1|AAM74224.1|  957|Caenorhabditis elegans EOR-2B protein.     38   0.013
AF519109-1|AAM74223.1|  972|Caenorhabditis elegans EOR-2A protein.     38   0.013
AF502570-1|AAM74152.1|  972|Caenorhabditis elegans EOR-2 protein.      38   0.013
Z82266-4|CAB05180.1|  227|Caenorhabditis elegans Hypothetical pr...    30   2.5  
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting...    29   4.4  
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting...    29   4.4  
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting...    29   4.4  

>Z79639-6|CAB01919.3|  957|Caenorhabditis elegans Hypothetical
           protein C44H4.7b protein.
          Length = 957

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 591 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 752
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686

Query: 753 PI 758
            +
Sbjct: 687 RV 688


>Z79639-5|CAD42645.2|  972|Caenorhabditis elegans Hypothetical
           protein C44H4.7a protein.
          Length = 972

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 591 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 752
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 753 PI 758
            +
Sbjct: 702 RV 703


>Z79598-9|CAB01869.3|  957|Caenorhabditis elegans Hypothetical
           protein C44H4.7b protein.
          Length = 957

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 591 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 752
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686

Query: 753 PI 758
            +
Sbjct: 687 RV 688


>Z79598-8|CAD42646.2|  972|Caenorhabditis elegans Hypothetical
           protein C44H4.7a protein.
          Length = 972

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 591 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 752
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 753 PI 758
            +
Sbjct: 702 RV 703


>AF519110-1|AAM74224.1|  957|Caenorhabditis elegans EOR-2B protein.
          Length = 957

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 591 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 752
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686

Query: 753 PI 758
            +
Sbjct: 687 RV 688


>AF519109-1|AAM74223.1|  972|Caenorhabditis elegans EOR-2A protein.
          Length = 972

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 591 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 752
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 753 PI 758
            +
Sbjct: 702 RV 703


>AF502570-1|AAM74152.1|  972|Caenorhabditis elegans EOR-2 protein.
          Length = 972

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +3

Query: 591 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 752
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 753 PI 758
            +
Sbjct: 702 RV 703


>Z82266-4|CAB05180.1|  227|Caenorhabditis elegans Hypothetical
           protein F23B2.6 protein.
          Length = 227

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +3

Query: 501 NKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMES 680
           N +++  S D+ + F  G F L K  V ++ +   +   ++ L K D   L+QKF  +  
Sbjct: 86  NLAETVISSDLQELF--GAFNLHKVSVNFNENGGAAGTGDITLKKYDADRLIQKFAGVAL 143

Query: 681 NGRVLH 698
           +G+V+H
Sbjct: 144 DGKVMH 149


>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
           protein protein8, isoform a protein.
          Length = 1132

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +3

Query: 219 RRRFGWVRDRAAEPEEFQDSGE--DWTPDADSNEPASRTGRKRVSKAP 356
           RR  G V    A P+  +D GE  D     D++E ASR  R + SKAP
Sbjct: 548 RRTGGAVTRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAP 595


>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
           protein protein8, isoform b protein.
          Length = 1780

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +3

Query: 219 RRRFGWVRDRAAEPEEFQDSGE--DWTPDADSNEPASRTGRKRVSKAP 356
           RR  G V    A P+  +D GE  D     D++E ASR  R + SKAP
Sbjct: 548 RRTGGAVTRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAP 595


>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
           protein protein8, isoform c protein.
          Length = 1697

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +3

Query: 219 RRRFGWVRDRAAEPEEFQDSGE--DWTPDADSNEPASRTGRKRVSKAP 356
           RR  G V    A P+  +D GE  D     D++E ASR  R + SKAP
Sbjct: 548 RRTGGAVTRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAP 595


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,800,752
Number of Sequences: 27780
Number of extensions: 394877
Number of successful extensions: 1253
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)