Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_E06
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1666 + 35202970-35203163,35203615-35203677,35204834-35205815     30   2.2  
08_02_1544 + 27787089-27787172,27787448-27787612,27787741-277878...    29   3.8  
01_06_0954 - 33322951-33323606,33324213-33325014                       29   6.6  
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353...    28   8.7  
01_06_0764 - 31804811-31804915,31805013-31805072,31805720-318059...    28   8.7  

>04_04_1666 + 35202970-35203163,35203615-35203677,35204834-35205815
          Length = 412

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 487 VEGAKGNDENDSHIVHVFVCSQRKQARALALSLAHAFNDA 606
           +E AK  D+ND+H +HV V    +QA+      A A  DA
Sbjct: 340 LEAAKVGDDNDNHHIHVVVVVPPEQAQPQPHQQAEADADA 379


>08_02_1544 +
           27787089-27787172,27787448-27787612,27787741-27787850,
           27788360-27788513,27788643-27788937,27788996-27789798
          Length = 536

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 125 LNKVAIFTWLLCSLLKATSSSALYKTSKS 39
           L  V + TW+L  +L   +SS LYK  KS
Sbjct: 271 LRNVVLLTWVLMGMLAGYTSSRLYKMFKS 299


>01_06_0954 - 33322951-33323606,33324213-33325014
          Length = 485

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
 Frame = +1

Query: 253 GSAPVERAASAPATAIGVRT---ALQSAKTLKKKPQKVNVDINIKGIIVTDAETENNVLA 423
           G A  E+AASAPA A    T   AL+ +   + +P +V+V    K +    A    ++ A
Sbjct: 14  GRAEDEKAASAPAAAAPAPTVWFALKRSLHCRSEPSEVHVP-RPKAVAAAAAGGGGHLSA 72

Query: 424 VSIYSI---SYCSADVANSRVFAVVEGAKGNDE 513
           +        S CS  +AN R   V+ G+K + E
Sbjct: 73  IVTKRAAPRSGCSRSIANLR--DVIHGSKRHPE 103


>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
            3536083-3536226,3536974-3537375,3537499-3537721,
            3537830-3542368,3542480-3542599,3543005-3543038,
            3543922-3544102,3544198-3544815,3545022-3551098,
            3551139-3551304,3551508-3551614,3552056-3552178,
            3553417-3553642
          Length = 5100

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +2

Query: 650  TRNGQHLGSDSRKNQTKRLTKKIGGHRLRLSLSPEFPNDF 769
            T NG    +     QTK+L   I   R      PEFP DF
Sbjct: 2148 TPNGSDSSTTLTAEQTKKLGSSILSSRAYAGTKPEFPLDF 2187


>01_06_0764 -
           31804811-31804915,31805013-31805072,31805720-31805959,
           31807367-31807525,31807653-31807769
          Length = 226

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 250 AGSAPVERAAS--APATAIGVRTALQSAKTLKKKPQKVNVDINIKGIIVTDAETENNVLA 423
           AGS PV  AA+  APA A GV      + +  +  +K+ + + ++G+     ET    ++
Sbjct: 54  AGSPPVVAAAAAPAPAAAAGVSYVTLGSFSWDQDAEKIKIYVFLEGVEQDKVETTFKPMS 113

Query: 424 V 426
           V
Sbjct: 114 V 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,761,259
Number of Sequences: 37544
Number of extensions: 375135
Number of successful extensions: 1096
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)