Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_E04
(908 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 304 2e-82
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 304 3e-82
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 304 3e-82
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 304 3e-82
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 304 3e-82
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 302 1e-81
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 300 5e-81
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 6e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 152 2e-36
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 119 1e-26
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 304 bits (747), Expect = 2e-82
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 373 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 552
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 553 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDX 732
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDE 216
Query: 733 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 217 DAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 256
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 304 bits (746), Expect = 3e-82
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 373 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 552
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 553 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDX 732
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 733 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 217 DAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 256
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 304 bits (746), Expect = 3e-82
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 373 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 552
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 553 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDX 732
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 733 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 217 DAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 256
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 304 bits (746), Expect = 3e-82
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 373 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 552
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 553 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDX 732
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 733 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 217 DAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 256
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 304 bits (746), Expect = 3e-82
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 373 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 552
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 553 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDX 732
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 733 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 217 DAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 256
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 302 bits (741), Expect = 1e-81
Identities = 138/220 (62%), Positives = 167/220 (75%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 373 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 552
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 553 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDX 732
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 733 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 217 DAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 256
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 300 bits (736), Expect = 5e-81
Identities = 139/220 (63%), Positives = 168/220 (76%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 373 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 552
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 553 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDX 732
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 164 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 223
Query: 733 DSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 224 DAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENPVYEKK 262
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 6e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +1
Query: 235 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 414
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 415 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 594
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 595 LNVPH 609
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 152 bits (368), Expect = 2e-36
Identities = 68/104 (65%), Positives = 86/104 (82%)
Frame = +1
Query: 541 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 720
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 721 QDDXDSFKRQFSKYIKLGVTAXAIEAIYKKAHEAIRADPSXKKK 852
++D D++K+QFS+YIK VT +E +YKKAH AIR +P +KK
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK 104
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 119 bits (287), Expect = 1e-26
Identities = 50/62 (80%), Positives = 60/62 (96%)
Frame = +1
Query: 193 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 372
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 373 AA 378
AA
Sbjct: 97 AA 98
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 84 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 191
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,322,155
Number of Sequences: 237096
Number of extensions: 2666069
Number of successful extensions: 4592
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4582
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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