Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_E02
         (943 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...   177   9e-45
Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical pr...    30   2.8  
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr...    30   2.8  
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr...    30   2.8  
U80442-6|AAB37669.1|  294|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr...    29   6.4  
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p...    29   6.4  
L12018-2|AAK68341.1|  525|Caenorhabditis elegans G protein regul...    29   6.4  
U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm recept...    28   8.4  

>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score =  177 bits (431), Expect = 9e-45
 Identities = 91/187 (48%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
 Frame = +1

Query: 199 MPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDW 378
           M +S+RDK VSLTK  KK    K  ++ E+R S+ +Y+++F+FTI NMR+T+   +R  +
Sbjct: 1   MARSRRDKNVSLTKVKKKTKDTKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60

Query: 379 KD-SRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSY 555
           K+ SRFFFGKN V++IALGK KSDE   QL+  S  LKGQCGL+ TN    +V   F   
Sbjct: 61  KENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEA 120

Query: 556 QASEYARAGFIATKDVLLPKGPLXDFSHTIEPHLRRLGLPTSLEKGVINLIKDIRFA-ER 732
              +YAR G +AT+ V+LP+GP+  F+ ++EP LR+LGLPT L+KGVI L +      E 
Sbjct: 121 SEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEG 180

Query: 733 CSLTPEQ 753
             LT EQ
Sbjct: 181 EPLTVEQ 187


>Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.10 protein.
          Length = 283

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = -3

Query: 551 LLNQFSTSGTSLFVISNPH*PFNFFDNRFSCSSISSLLVLPRAI--AITLFFPKKNLESF 378
           LL Q ST     F+I N H  F+      S  ++ S+L L  A+   I ++FP      F
Sbjct: 67  LLTQISTD----FIIKNVH--FSLVIPAASIGNMRSVLTLLIALERVIAIYFPI----FF 116

Query: 377 QSFRRSF-NFVFLMLLMVNKNMCSYLLSEF 291
             +R+   NFVFL++++ ++    Y++  F
Sbjct: 117 HIYRQKLPNFVFLLIILTSELFNQYMIFGF 146


>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 196 NMPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFL 324
           +M  ++ D+ V  T  +KKG   KQ  IE+I    S+ EHI L
Sbjct: 37  SMVMTEEDRNV-FTSIDKKGGGSKQMAIEDIYQKKSQLEHILL 78


>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 196 NMPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFL 324
           +M  ++ D+ V  T  +KKG   KQ  IE+I    S+ EHI L
Sbjct: 37  SMVMTEEDRNV-FTSIDKKGGGSKQMAIEDIYQKKSQLEHILL 78


>U80442-6|AAB37669.1|  294|Caenorhabditis elegans Hypothetical
           protein T20F5.7 protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 728 SANLISFIRLITPFSRDVGKPKRLKCGSIVCEK 630
           +A+L++ +  I  F     KPK L CG  VCE+
Sbjct: 9   TADLVTCLICIREFDTKTRKPKVLHCGHTVCEE 41


>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = +1

Query: 433 KTKSDE---IEEQLNLLSKKLKGQCGLLMTNRDVP-DVLNWFKSYQASEYARAGFIATKD 600
           K K +E   I+  +N L +K++     +  +R    D +N F S+ A          ++ 
Sbjct: 429 KRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEINRSKSRF 488

Query: 601 VLLPKGPLXDFSHTIEP 651
             +PKGPL  +   I+P
Sbjct: 489 QTVPKGPLGKYITLIDP 505


>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = +1

Query: 433 KTKSDE---IEEQLNLLSKKLKGQCGLLMTNRDVP-DVLNWFKSYQASEYARAGFIATKD 600
           K K +E   I+  +N L +K++     +  +R    D +N F S+ A          ++ 
Sbjct: 429 KRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEINRSKSRF 488

Query: 601 VLLPKGPLXDFSHTIEP 651
             +PKGPL  +   I+P
Sbjct: 489 QTVPKGPLGKYITLIDP 505


>L12018-2|AAK68341.1|  525|Caenorhabditis elegans G protein
           regulator protein 1 protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 538 SVHQAHLYLSLAIHTDLLIFLITDLVALLFH 446
           +VH A+   +L   TDLL F+I DL + LF+
Sbjct: 225 AVHIAYYDKALYAETDLLFFIIRDLRSALFY 255


>U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm receptor
           protein 136 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 582 LHCNKRCFITQRSSXRFFTHY*ATFKTFGLTYISRKRCY 698
           LHC    F+    S +FF  Y A  KT  L Y+  K+ +
Sbjct: 98  LHCVLTGFVASLLSCQFFYRYVALCKTHLLVYLQGKKLF 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,568,142
Number of Sequences: 27780
Number of extensions: 354331
Number of successful extensions: 998
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)