Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_D23
         (925 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   0.99 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.7  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect(2) = 0.99
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -2

Query: 552 PPPPPXPXGXGFFXGG 505
           PPPPP P       GG
Sbjct: 783 PPPPPPPPPSSLSPGG 798



 Score = 22.2 bits (45), Expect(2) = 0.99
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 564 GGXXPPPPPXP 532
           G   PPPPP P
Sbjct: 781 GSPPPPPPPPP 791


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
 Frame = +1

Query: 418 GGGGGGFXXXKKXPPPXGXGGXFFXAXXPXPXK---KTXXPGXGGGGXXXXPPXGG 576
           GGGGGG           G  G F  A      +   K   PG GGGG     P GG
Sbjct: 170 GGGGGG----------GGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGG 215


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = -2

Query: 573 PPXGGXXPPPPPXPXGXGFFXGGXXXGPKKXXPXPXGGG 457
           PP GG   P  P P       GG   G K     P GGG
Sbjct: 495 PPPGGR--PNAPNPSSAVTPGGGRAEGDKVTFQIPNGGG 531


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 566 GGXXXXPPPPXPGXXV 519
           GG    PPPP PG  V
Sbjct: 525 GGPLGPPPPPPPGGAV 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,282
Number of Sequences: 2352
Number of extensions: 6959
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)