Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_D16
         (941 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 11/58 (18%)
 Frame = +3

Query: 681 PXAPPPXGXLKXXPPXLGGAPPPXXF-------*NPR--GFPPXXP--PXGXPPXSPP 821
           P  PPP G +   PP     PPP           NP    FP   P  P   PP +PP
Sbjct: 531 PPPPPPGGAVLNIPPQF--LPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPP 586



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
 Frame = +3

Query: 690 PPPXGXLKXXPPXLGGAPP--PXXF*N-PRGFPPXXPPXGXPPXSPP 821
           PPP   L+     L  A    P  F N P   PP  PP   PP  PP
Sbjct: 549 PPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPP-PPPMGPP 594



 Score = 22.2 bits (45), Expect(2) = 3.7
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -1

Query: 431 PPPPPPXPXKKXXXXGGGXXXFXXXKGGPKXXRXP 327
           PPPPPP         GG         GGP   R P
Sbjct: 585 PPPPPPMGPPPSPLAGG-------PLGGPAGSRPP 612



 Score = 20.6 bits (41), Expect(2) = 3.7
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -1

Query: 467 PXGGGGXXXRXXPPPPPPXP 408
           P G         PP PPP P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPP 589


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -1

Query: 431 PPPPPPXPXKKXXXXG 384
           PPPPPP P       G
Sbjct: 783 PPPPPPPPPSSLSPGG 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,954
Number of Sequences: 2352
Number of extensions: 10016
Number of successful extensions: 36
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)