Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_D12
         (857 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    56   8e-08
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    56   8e-08
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    56   8e-08
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    56   8e-08
AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p pro...    29   8.2  
AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-P...    29   8.2  

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 55.6 bits (128), Expect = 8e-08
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = +1

Query: 214 EDKATWKSNYFVXIIQLLDEYPKCLSXGAHNVGPPKMXKIR 336
           E+KA WK+ YF+ +++L DE+PKC   GA NVG  +M  IR
Sbjct: 4   ENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIR 44


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 55.6 bits (128), Expect = 8e-08
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = +1

Query: 214 EDKATWKSNYFVXIIQLLDEYPKCLSXGAHNVGPPKMXKIR 336
           E+KA WK+ YF+ +++L DE+PKC   GA NVG  +M  IR
Sbjct: 4   ENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIR 44


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 55.6 bits (128), Expect = 8e-08
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = +1

Query: 214 EDKATWKSNYFVXIIQLLDEYPKCLSXGAHNVGPPKMXKIR 336
           E+KA WK+ YF+ +++L DE+PKC   GA NVG  +M  IR
Sbjct: 4   ENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIR 44


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 55.6 bits (128), Expect = 8e-08
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = +1

Query: 214 EDKATWKSNYFVXIIQLLDEYPKCLSXGAHNVGPPKMXKIR 336
           E+KA WK+ YF+ +++L DE+PKC   GA NVG  +M  IR
Sbjct: 4   ENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIR 44


>AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p
           protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 742 LGXGGGXQXWEGGX*KXPPXFRGVXG-GNXGGXXNPPXNFGG 620
           +G  GG   + GG    PP   G  G  + GG   PP  FGG
Sbjct: 91  MGGPGGQPPYAGGPGGQPPYVGGPGGQPHYGGGAPPPQAFGG 132


>AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-PA,
           isoform A protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 742 LGXGGGXQXWEGGX*KXPPXFRGVXG-GNXGGXXNPPXNFGG 620
           +G  GG   + GG    PP   G  G  + GG   PP  FGG
Sbjct: 91  MGGPGGQPPYAGGPGGQPPYVGGPGGQPHYGGGAPPPQAFGG 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,710,322
Number of Sequences: 53049
Number of extensions: 554477
Number of successful extensions: 671
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)