Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_D12
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...    58   6e-09
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 22/41 (53%), Positives = 31/41 (75%)
 Frame = +1

Query: 214 EDKATWKSNYFVXIIQLLDEYPKCLSXGAHNVGPPKMXKIR 336
           ED++TWK+NYF  +++L +EYPKCL  G  NVG  +M +IR
Sbjct: 4   EDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIR 44


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 22/73 (30%), Positives = 24/73 (32%)
 Frame = -2

Query: 739 GXGGGXQXWEGGX*KXPPXFRGVXGGNXGGXXNPPXNFGGKKXXXKKSFFXXXAXFWGGX 560
           G GGG   W GG        RG   GN GG  N   N GG      +          GG 
Sbjct: 56  GRGGGGSGWGGG--------RGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG 107

Query: 559 XXXKGGXANRXXG 521
              +GG      G
Sbjct: 108 GGGRGGGGGGGGG 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,676,046
Number of Sequences: 27780
Number of extensions: 271368
Number of successful extensions: 364
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)