Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_D09
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0628 + 12365109-12365150,12366315-12366411,12366489-123665...    56   5e-08
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    32   0.55 
05_05_0299 - 23930657-23932627                                         30   2.2  

>02_02_0628 +
           12365109-12365150,12366315-12366411,12366489-12366554,
           12367884-12367963,12368051-12368125,12368232-12368381,
           12369816-12369881,12370141-12370206,12370653-12370763,
           12370917-12371003,12371087-12371193,12372141-12372255,
           12372472-12372537,12373521-12373615,12373700-12373880
          Length = 467

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 29/84 (34%), Positives = 50/84 (59%)
 Frame = +1

Query: 343 IEAXFDLCEDDXVAIRKQAIKDLPVLCKEHKEHTXRIADILAQLLQSXDSTEINVVTXSL 522
           +EA FDL + + +A R QAI+  P+L K+  E   +IADIL QLL S ++ E + V  +L
Sbjct: 1   MEAMFDLVDMEELATRIQAIRGFPLLAKD-AEFVSKIADILGQLLASEENVERDAVHKAL 59

Query: 523 VTXLKSDPXGALSGIFSXIXQNTD 594
           ++ ++ D   +L  +F  +   ++
Sbjct: 60  MSLIRQDVKSSLQPLFKHVESGSE 83


>07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-571542,
            571635-571885,572018-572128,572209-572320,572626-572716,
            573168-573507,573678-573900,573946-574204,574274-574481,
            574572-574622,574712-574870,574956-575120,575322-575399,
            575732-576031,576107-576259,576871-576918,577019-577188,
            577738-577852,578462-578623,578789-578893,578969-579199,
            579277-579410,579484-579738,579822-580110,580214-580306,
            580395-580520,580646-580897
          Length = 1693

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = +1

Query: 277  KRXASQFIAKFFNSLPTLSEQAIEAXFDLCEDDXVAIRKQAIKDLPVLC--KEHKEHTXR 450
            +  A + + +   S P +  + IE   +  +D  V++RK+AIK +  LC    + + T  
Sbjct: 782  REAALELVGRHIASHPDVGLKYIEKVAERIKDTGVSVRKRAIKIIRDLCASNPNTDTTRA 841

Query: 451  IADILAQLLQSXDSTEINV-VTXSLVTXLK 537
              +I++++     S ++ V VT  +V  +K
Sbjct: 842  FVEIISRVNDEESSVQLLVTVTWQIVFHVK 871


>05_05_0299 - 23930657-23932627
          Length = 656

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 205 KDEISQHEKEYLEILAAVKGSDKEKRXASQFIAKFFNSLPTL 330
           K++  + +KE  +IL  + G D+E    S+F+ KFF   P L
Sbjct: 227 KEDDDEEKKETEQILIDIFGKDEELDENSKFLKKFFLERPYL 268


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,688
Number of Sequences: 37544
Number of extensions: 218415
Number of successful extensions: 368
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)