Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_D01
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.013
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.013
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.013
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.040
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.040
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.069
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.069
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 34 0.16
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.65
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.65
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.65
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.65
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.85
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.85
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.85
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.85
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.85
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.5
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 1.5
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.4
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 4.5
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.0
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 29 6.0
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 29 6.0
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 6.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.0
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 7.9
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 28 7.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.9
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 28 7.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 7.9
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = +1
Query: 589 GKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPP 768
G P G P GP P P G + PP PP
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPP-PPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 769 PPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPP PP P PPP P + P PP
Sbjct: 761 PPP-----PPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = +1
Query: 589 GKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPP 768
G P G P GP P P G + PP PP
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPP-PPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 769 PPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPP PP P PPP P + P PP
Sbjct: 761 PPP-----PPGGCPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = +1
Query: 589 GKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPP 768
G P G P GP P P G + PP PP
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPPPPP-PPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 769 PPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPP PP P PPP P + P PP
Sbjct: 344 PPP-----PPGGCPPPPPPPPPGGFKGGPPPPPP 372
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.040
Identities = 18/71 (25%), Positives = 22/71 (30%)
Frame = +1
Query: 658 GPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPX 837
G P+ P PP + + PPPPP PP PPP
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
Query: 838 KYXXXPXXSPP 870
+Y PP
Sbjct: 342 RYPGGMPPPPP 352
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Frame = +1
Query: 661 PXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXP---PPXQ 831
P P G G + PP + PPPPP P P P P
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 832 PXKYXXXPXXSPP 870
P Y P PP
Sbjct: 360 PGMYPPPPPSRPP 372
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/87 (26%), Positives = 26/87 (29%)
Frame = +1
Query: 574 PXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXV 753
P G G P P F G P P G + PP +
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP--PPPGMRYPGGMPPPPPPRYPSAGP- 360
Query: 754 XXQPPPPPKKXXXPPXKXPXXPPPXQP 834
PPPPP + PP PPP P
Sbjct: 361 GMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXP---PPXQPXKYXXXPXXSPP 870
PPPPP+ P P P PP P + P PP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXP---XXPPPXQPXKYXXXPXXSPP 870
PPPPP PP P P P P P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 302
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.040
Identities = 18/71 (25%), Positives = 22/71 (30%)
Frame = +1
Query: 658 GPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPX 837
G P+ P PP + + PPPPP PP PPP
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
Query: 838 KYXXXPXXSPP 870
+Y PP
Sbjct: 352 RYPGGMPPPPP 362
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Frame = +1
Query: 661 PXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXP---PPXQ 831
P P G G + PP + PPPPP P P P P
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 832 PXKYXXXPXXSPP 870
P Y P PP
Sbjct: 370 PGMYPPPPPSRPP 382
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/87 (26%), Positives = 26/87 (29%)
Frame = +1
Query: 574 PXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXV 753
P G G P P F G P P G + PP +
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP--PPPGMRYPGGMPPPPPPRYPSAGP- 370
Query: 754 XXQPPPPPKKXXXPPXKXPXXPPPXQP 834
PPPPP + PP PPP P
Sbjct: 371 GMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXP---PPXQPXKYXXXPXXSPP 870
PPPPP+ P P P PP P + P PP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXP---XXPPPXQPXKYXXXPXXSPP 870
PPPPP PP P P P P P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 312
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 35.1 bits (77), Expect = 0.069
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +1
Query: 679 PXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPX 858
P G PP +K + PPPP PP P PP P P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
Query: 859 XSPP 870
+PP
Sbjct: 173 RTPP 176
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/70 (24%), Positives = 22/70 (31%)
Frame = +1
Query: 661 PXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPXK 840
P P+K G PP + +PP P P + P P P P +
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPR 185
Query: 841 YXXXPXXSPP 870
P PP
Sbjct: 186 TPPSPIPPPP 195
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = +2
Query: 650 PXKXPXPKKGLXGEXXSXGXXPXRNIKKXNXXFXLXPNPXXPPKNXXXPPXNXPXGPPXP 829
P P P+K G P R + P P PP P P PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPR---SPPPRRPPMTPPSPQRRPPRTPPSP 178
Query: 830 NXXNTXFXPXFPPRXP 877
N P P P
Sbjct: 179 EPRNPPRTPPSPIPPP 194
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPPP PP P PPP P ++ P PP
Sbjct: 31 PPPPPPMCAPPPL--PCPPPPICPPQFCPPPPMCPP 64
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 741 PXFXXXPTPXXPQKTXXXPLXTPLXAPPXPTXXIPXSPPXFPPGXP 878
P P P P + P P PP P P PP P P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.16
Identities = 29/132 (21%), Positives = 35/132 (26%)
Frame = +1
Query: 475 PXPPXXGXGFWAXXPFLXXXXPGXRXXXFXKXXPXPXXGKXGXPQXRGXPXEKTFXQGXX 654
P PP G G P + P P P G P + +
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNAS 155
Query: 655 KGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQP 834
+ P P P G P + Q +PPPPPK PP P
Sbjct: 156 RRPPP---PPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSA 212
Query: 835 XKYXXXPXXSPP 870
Y PP
Sbjct: 213 EGYASRRPPPPP 224
Score = 32.7 bits (71), Expect = 0.37
Identities = 29/122 (23%), Positives = 36/122 (29%)
Frame = +1
Query: 475 PXPPXXGXGFWAXXPFLXXXXPGXRXXXFXKXXPXPXXGKXGXPQXRGXPXEKTFXQGXX 654
P PP G G P + P P P G P + +
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNAS 248
Query: 655 KGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQP 834
+ P P P G P + Q +PPPPPK PP PP +P
Sbjct: 249 RRPPP---PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP------PPTGEP 299
Query: 835 XK 840
K
Sbjct: 300 EK 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/115 (22%), Positives = 32/115 (27%)
Frame = +1
Query: 475 PXPPXXGXGFWAXXPFLXXXXPGXRXXXFXKXXPXPXXGKXGXPQXRGXPXEKTFXQGXX 654
P PP G G P + P P P G P + +
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYAS 217
Query: 655 KGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXP 819
+ P P P G P + Q +PPPPPK PP P
Sbjct: 218 RRPPP---PPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 269
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PP PK PP + P P QP + P PP
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PP PK PP + P P QP + P PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQP 834
PPPPP P P PPP P
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPP 520
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQP 834
PPPPP K P P PPP P
Sbjct: 91 PPPPPPKPTIRPPPIPASPPPRPP 114
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 766 PPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPP PP K PPP +P SPP
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 110
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQP 834
PPPPP K P P PPP P
Sbjct: 313 PPPPPPKPTIRPPPIPASPPPRPP 336
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 766 PPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPP PP K PPP +P SPP
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPP 332
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 758 PNPXXPP--KNXXXPPXNXPXGPPXPNXXNTXFXPXFPPRXPXG 883
P+P PP PP P GPP P P P R P G
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPG 281
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGPPXPNXXNTXFXPXFPPRXPXGXPXP 895
P P P P GPP P P P R P G P P
Sbjct: 229 PGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.85
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 760 QPPPPPKKXXXPPXKXPXXPPPXQP 834
QPPPPP PP PPP P
Sbjct: 131 QPPPPPPPPHYPPPPPHYPPPPPAP 155
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 712 PPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PP K Q PPP P P PP P P +PP
Sbjct: 31 PPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPP 83
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 712 PPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PP K PPPPP PP + PPP SPP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPPP PP + PPP P PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/98 (23%), Positives = 25/98 (25%)
Frame = +1
Query: 574 PXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXV 753
P P G P G P G P P G PP +
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPR------AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 326
Query: 754 XXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSP 867
PPPP +K P P PP P P
Sbjct: 327 GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 364
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGPPXPNXXNTXFXP--XFPPRXPXGXPXP 895
P P PPK PP PP P + P PP P G P P
Sbjct: 237 PPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXP-XXSPP 870
PPPPP PP PPP P SPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 273
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 769 PPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPP+ PP PPP P + P SPP
Sbjct: 313 PPPQAGGSPPPAGTGSPPPP-PRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 712 PPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PP K PPPPP PP + PPP SPP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPPP PP + PPP P PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/98 (23%), Positives = 25/98 (25%)
Frame = +1
Query: 574 PXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXV 753
P P G P G P G P P G PP +
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPR------AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 347
Query: 754 XXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSP 867
PPPP +K P P PP P P
Sbjct: 348 GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 385
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGPPXPNXXNTXFXP--XFPPRXPXGXPXP 895
P P PPK PP PP P + P PP P G P P
Sbjct: 258 PPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXP-XXSPP 870
PPPPP PP PPP P SPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 294
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 769 PPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPP+ PP PPP P + P SPP
Sbjct: 334 PPPQAGGSPPPAGTGSPPPP-PRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 712 PPEKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PP K PPPPP PP + PPP SPP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPPP PP + PPP P PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/98 (23%), Positives = 25/98 (25%)
Frame = +1
Query: 574 PXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQKXKXXXXV 753
P P G P G P G P P G PP +
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPR------AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 332
Query: 754 XXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSP 867
PPPP +K P P PP P P
Sbjct: 333 GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 370
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGPPXPNXXNTXFXP--XFPPRXPXGXPXP 895
P P PPK PP PP P + P PP P G P P
Sbjct: 243 PPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXP-XXSPP 870
PPPPP PP PPP P SPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 279
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 769 PPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPP+ PP PPP P + P SPP
Sbjct: 319 PPPQAGGSPPPAGTGSPPPP-PRQKRQAPERSPP 351
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 751 VXXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSP 867
V PPP P + PP P PPP P P P
Sbjct: 53 VCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPPP P P PPP P PP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPP 1378
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 794 PPXNXPXGPPXPNXXNTXFXPXFPPRXPXGXP 889
PP P GPP P+ + P +PP P P
Sbjct: 69 PPGPPPHGPPPPHLLHALPHPAYPPGHPLHMP 100
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGPPXPNXXNTXFXPXFP-PRXPXGXPXP 895
P P PP N P G P NT P P P P G P P
Sbjct: 216 PGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGP 262
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/110 (24%), Positives = 32/110 (29%)
Frame = +1
Query: 538 PGXRXXXFXKXXPXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGPXXGXXFLXXXPP 717
P + K P P P+ + P K + K P PK P P
Sbjct: 161 PNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPK-PEPKPKPKPEPK--PKPKP 217
Query: 718 EKHQKXKXXXXVXXQPPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSP 867
E K K +P P PK P K P P K P P
Sbjct: 218 EPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKP 267
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 766 PPPPKKXXXPPXKXPXXPPPXQP 834
PPPP PP P PPP P
Sbjct: 428 PPPPLPMAGPPGMFPMMPPPPLP 450
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.4
Identities = 28/98 (28%), Positives = 33/98 (33%), Gaps = 6/98 (6%)
Frame = +1
Query: 565 KXXPXPXXGKXGXPQXRGXPXEK----TFXQGXXKGPXPKKGPXXGXXFLXXXPPEKHQK 732
K P P G G P +G P + T Q G GP G P EK
Sbjct: 155 KCPPGPP-GPAGPPGPKGLPGPQGDAGTSGQDGVPGLPGPPGPS-GPQGAPGVPGEKGPT 212
Query: 733 XKXXXXVXXQPPPPPKKXXXPPXKXPXXPP--PXQPXK 840
+ + PP PP P + P PP QP K
Sbjct: 213 GEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGK 250
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 773 PPKNXXXPPXNXPXGPPXPNXXNTXFXPXFPPRXPXGXPXP 895
P + PP + P GPP P+ P PP G P P
Sbjct: 125 PGHHFQGPPQHFPPGPPRPHFPGPP-GPHRPPEHYPGPPRP 164
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 713 PXRNIKKXNXXFXLXPNPXXPPKNXXXPPXNXPXGPPXPNXXNTXFXPXFP-PRXPXGXP 889
P N N P+P P N P P G P PN N P P P P G
Sbjct: 1007 PSPNGPSPNGPSPNGPSPNGPSPNGPTPNWPSPNG-PSPNGPNGPSDPNKPGPNGPNGPS 1065
Query: 890 XP 895
P
Sbjct: 1066 DP 1067
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGP-----PXPNXXNTXFXPXFP-PRXPXGXPXP 895
PN P + P N P GP P PN N P P P P G P
Sbjct: 1072 PNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDP 1123
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGP-----PXPNXXNTXFXPXFP-PRXPXGXPXP 895
PN P + P N P GP P PN N P P P P G P
Sbjct: 1100 PNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDP 1151
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGP-----PXPNXXNTXFXPXFP-PRXPXGXPXP 895
PN P + P N P GP P PN N P P P P G P
Sbjct: 1044 PNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDP 1095
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGP-----PXPNXXNTXFXPXFP-PRXPXGXPXP 895
PN P + P N P GP P PN N P P P P G P
Sbjct: 1254 PNGPNEPSDPNRPGPNGPNGPLDPNKPGPNGPNGPSDPNKPGPNGPNGPSDP 1305
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGP-----PXPNXXNTXFXPXFP-PRXPXGXPXP 895
PN P + P N P GP P PN N P P P P G P
Sbjct: 1282 PNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDP 1333
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGP-----PXPNXXNTXFXPXFP-PRXPXGXPXP 895
PN P + P N P GP P PN N P P P P G P
Sbjct: 1324 PNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDP 1375
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 751 VXXQPPPPPKKXXXPPXKXPXXPP 822
V PPPPP PP P PP
Sbjct: 246 VVAPPPPPPTTTTAPPPAAPEQPP 269
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 766 PPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPP+ PP P PPP Q + P P
Sbjct: 94 PPPPRNNCLPP---PGPPPPCQQYQQPQPPPCQRP 125
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 766 PPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPP+ PP P PPP Q + P P
Sbjct: 94 PPPPRNNCLPP---PGPPPPCQQYQQPQPPPCQRP 125
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 766 PPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPP+ PP P PPP Q + P P
Sbjct: 94 PPPPRNNCLPP---PGPPPPCQQYQQPQPPPCQRP 125
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 160 PPXXKXGXXPQKKXXXGFXPPGPXXGAPP 246
PP G P G PP P GAPP
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPPPPMFGAPP 115
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 751 VXXQPPPPPKKXXXPPXKXPXXPP 822
V PPPPP PP P PP
Sbjct: 246 VVAPPPPPPTTTTAPPPAAPEQPP 269
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 760 QPPPPPKKXXXPPXKXPXXPPPXQP 834
+PP P + PP + PPP QP
Sbjct: 38 RPPSPSRPQRPPPSRPQRPPPPRQP 62
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -3
Query: 894 GXGXPXGXRGGXXGXXXVFXXLGXGGPXGXFXGGXXXFFGGXXG 763
G G P G RGG G + G G GG F GG G
Sbjct: 307 GRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRG 350
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQPXKYXXXPXXSPP 870
PPPPP P PPP P P PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +3
Query: 741 PXFXXXPTPXXPQKTXXXP--LXTPLXAPPXPTXXIPXSPPXFPPGXPXXXP 890
P P P P K P TP+ P P +PP PP P P
Sbjct: 318 PTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPP 369
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 876 GXRGGXXGXXXVFXXLGXGGPXGXFXGGXXXFFGGXXGLGXN 751
G GG G F G GG G G FGG G G N
Sbjct: 32 GGGGGFGGGPGQFGRGGFGGGPGSNYGPGRGGFGGNGGFGGN 73
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 758 PNPXXPPKNXXXPPXNXPXGPPXPNXXNTXFXPXFPPRXP 877
P P PP P P GPP + T PP+ P
Sbjct: 103 PGPPGPPGEPGQPGSAGPPGPPGEDNTATFAPITCPPKDP 142
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/85 (24%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = +1
Query: 574 PXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGP--XXGXXFLXXXPPEKHQKXKXXX 747
P G+ G P +G P + + KGP GP G P +
Sbjct: 187 PQGEPGEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIG 246
Query: 748 XVXXQPPPPPKKXXXPPXKXPXXPP 822
+ PP P+ PP P PP
Sbjct: 247 EMGPPGPPGPRGEPGPP--GPFGPP 269
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQP 834
PPPPP+ P PPP P
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPP 636
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 763 PPPPPKKXXXPPXKXPXXPPPXQP 834
PPPPP+ P PPP P
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPP 462
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/85 (24%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = +1
Query: 574 PXPXXGKXGXPQXRGXPXEKTFXQGXXKGPXPKKGP--XXGXXFLXXXPPEKHQKXKXXX 747
P G+ G P +G P + + KGP GP G P +
Sbjct: 187 PQGEPGEQGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIG 246
Query: 748 XVXXQPPPPPKKXXXPPXKXPXXPP 822
+ PP P+ PP P PP
Sbjct: 247 EMGPPGPPGPRGEPGPP--GPFGPP 269
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 773 PPKNXXXPPXNXPXGPPXPNXXNTXFXPXFPPRXPXGXPXP 895
PP + P P GPP P N P F P P P P
Sbjct: 25 PPPDWFFPGPLRPWGPPPPWHRNRG-PPPFGPPPPWDRPPP 64
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 894 GXGXPXGXRGGXXGXXXVFXXLGXGGP-XGXFXGGXXXFFGGXXG 763
G G G RGG G G GG G F GG F GG G
Sbjct: 6 GRGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRG 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.150 0.521
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,702,539
Number of Sequences: 27780
Number of extensions: 233237
Number of successful extensions: 1846
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -