Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_C21
(1062 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.037
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.037
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.037
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.15
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.15
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.15
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.15
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.46
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.46
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.46
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 0.78
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 27 3.1
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 3.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 3.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 3.2
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 5.6
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 5.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 7.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 7.4
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 7.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 7.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 7.4
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 7.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 7.4
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 28 9.8
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 28 9.8
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 28 9.8
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 28 9.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.8
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 28 9.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 9.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.3 bits (80), Expect = 0.037
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGGXXKKXXXX 995
PPPP PP SP + PPPP PPPPP G +
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPAGGSPPPPRAGSP 297
Query: 996 FPP 1004
PP
Sbjct: 298 PPP 300
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXG 965
PPPP P SP PPPP PPPPP G
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.3 bits (80), Expect = 0.037
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGGXXKKXXXX 995
PPPP PP SP + PPPP PPPPP G +
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPAGGSPPPPRAGSP 318
Query: 996 FPP 1004
PP
Sbjct: 319 PPP 321
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXG 965
PPPP P SP PPPP PPPPP G
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.037
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGGXXKKXXXX 995
PPPP PP SP + PPPP PPPPP G +
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPAGGSPPPPRAGSP 303
Query: 996 FPP 1004
PP
Sbjct: 304 PPP 306
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXG 965
PPPP P SP PPPP PPPPP G
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.15
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +3
Query: 807 FFFPPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXG 965
FF PPP P F P P PPPP PPPPP G
Sbjct: 63 FFIPPP---VPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFG 112
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +3
Query: 810 FFPPPPXXX----PPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGG 971
F PPPP PP F P P PPPP PPPPP G G
Sbjct: 73 FIPPPPGPGGIPPPPPMFA-----GGIPPPPPMMG-GIPPPPPMFGAPPPPPPPSGLG 124
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.3 bits (75), Expect = 0.15
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 6/69 (8%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXP------PPPXXXFXPPPPPXXGGGXX 977
PPPP PP F P P P PPP PPPPP G G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP-----PPPPPPSGAGGP 663
Query: 978 KKXXXXFPP 1004
PP
Sbjct: 664 ASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.3 bits (75), Expect = 0.15
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 6/69 (8%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXP------PPPXXXFXPPPPPXXGGGXX 977
PPPP PP F P P P PPP PPPPP G G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP-----PPPPPPSGAGGP 489
Query: 978 KKXXXXFPP 1004
PP
Sbjct: 490 ASVLAKLPP 498
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.15
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPP 956
PPPP PP P PPPP PPPPP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.46
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGGXXKKXXXX 995
PPPP PP P PPPP PPPPP G K
Sbjct: 729 PPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 996 FPP 1004
PP
Sbjct: 787 PPP 789
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFX--PPPPPXXG 965
PPPP PP P P PPPP F PPPPP G
Sbjct: 745 PPPPGGLPPI-----SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.46
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGGXXKKXXXX 995
PPPP PP P PPPP PPPPP G K
Sbjct: 729 PPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 996 FPP 1004
PP
Sbjct: 787 PPP 789
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFX--PPPPPXXG 965
PPPP PP P P PPPP F PPPPP G
Sbjct: 745 PPPPGGLPPI-----SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.46
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGGXXKKXXXX 995
PPPP PP P PPPP PPPPP G K
Sbjct: 312 PPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 996 FPP 1004
PP
Sbjct: 370 PPP 372
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFX--PPPPPXXG 965
PPPP PP P P PPPP F PPPPP G
Sbjct: 328 PPPPGGLPPI-----SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 28.7 bits (61), Expect(2) = 0.78
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPP 953
PPPP F + P P + P PP F PPP
Sbjct: 189 PPPPSFNINPFQPMFSQPPPPPLPPNSQFMTPPPRPPPAPFSIPPP 234
Score = 21.8 bits (44), Expect(2) = 0.78
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 942 PPPPPXXGGG 971
PPPPP GG
Sbjct: 252 PPPPPQTDGG 261
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXG 965
PPPP PP + P PPPP PPPPP G
Sbjct: 67 PPPPPPPPPLISILQQAPPPPP-----------PPPPPTLKAPPPPPILG 105
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 915 PPPPXXXFXPPPPPXXGG 968
PPPP PPPPP GG
Sbjct: 581 PPPPMLGGPPPPPPPPGG 598
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 915 PPPPXXXFXPPPPPXXGGG 971
PPPP PPPPP GG
Sbjct: 580 PPPPPMLGGPPPPPPPPGG 598
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPP--PXXGG 968
PPPP PP P S P PP PPPP P GG
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPP--PXXGG 968
PPPP PP P S P PP PPPP P GG
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGG 968
PPPP P P P PPPP PPPPP G
Sbjct: 264 PPPPPSVTPM---------PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGG 968
PPPP P P P PPPP PPPPP G
Sbjct: 274 PPPPPSVTPM---------PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 915 PPPPXXXFXPPPPP 956
PPPP PPPPP
Sbjct: 74 PPPPPMPCPPPPPP 87
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 810 FFPPPPXXXPP 842
F PPPP PP
Sbjct: 64 FCPPPPICPPP 74
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/65 (27%), Positives = 23/65 (35%)
Frame = +3
Query: 810 FFPPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXGGGXXKKXX 989
FF PP PP +F P P + R P P + PPPP ++
Sbjct: 20 FFERPP---PPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPP 76
Query: 990 XXFPP 1004
PP
Sbjct: 77 WGLPP 81
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 915 PPPPXXXFXPPPPPXXGGG 971
PPPP F PPPP G G
Sbjct: 297 PPPPRGHFPPPPPHFMGRG 315
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPP----PPXXXFXPPPPPXXGG 968
PPP PP F + P P + PP PP P PP GG
Sbjct: 317 PPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGG 371
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +3
Query: 810 FFPPPP-XXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPP 956
FFPPPP PP F + P P PP F PPP P
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP---RGFMPPPHP 341
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 915 PPPPXXXFXPPPPPXXGGG 971
PPPP F PPPP G G
Sbjct: 297 PPPPRGHFPPPPPHFMGRG 315
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPP----PPXXXFXPPPPPXXGG 968
PPP PP F + P P + PP PP P PP GG
Sbjct: 317 PPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGG 371
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +3
Query: 810 FFPPPP-XXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPP 956
FFPPPP PP F + P P PP F PPP P
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP---RGFMPPPHP 341
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 888 PXKKKRXXXPPPPXXXFXPPPPP 956
P K PPPP PPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPP 311
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 888 PXKKKRXXXPPPPXXXFXPPPPP 956
P K PPPP PPPPP
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPP 311
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.6
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 12/76 (15%)
Frame = +3
Query: 813 FPPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPP----PXXXFXPP--------PPP 956
F PPP PP F P P PPP + PP PPP
Sbjct: 378 FAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPP 437
Query: 957 XXGGGXXKKXXXXFPP 1004
G G FPP
Sbjct: 438 PGGPGAYGPPPTGFPP 453
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 888 PXKKKRXXXPPPPXXXFXPPPPP 956
P + + PPPP PPPPP
Sbjct: 782 PPRLQGGIPPPPPLGIIPPPPPP 804
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 915 PPPPXXXFXPPPPPXXG 965
PPPP PPPPP G
Sbjct: 97 PPPPHYYTQPPPPPQSG 113
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 7.4
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Frame = +3
Query: 789 KKKXXXFFFPPPPXXXPPX-FFXFXKKXXXXPXS--PXKKKRXXXPPPPXXXFXPPPPP- 956
KKK PPP PP + P S P ++ PPPP PPP
Sbjct: 1277 KKKPPLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQM 1336
Query: 957 --XXGGGXXKKXXXXFPP 1004
GG FPP
Sbjct: 1337 YRDRSGGGGGSMRGGFPP 1354
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 816 PPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPP 956
PPPP PP P P K P P PPPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLP----VPPPPP 1381
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 819 PPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPPXXG 965
PP PP F F + P P PP PPPP G
Sbjct: 666 PPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPG 714
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 7.4
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Frame = +3
Query: 789 KKKXXXFFFPPPPXXXPPX-FFXFXKKXXXXPXS--PXKKKRXXXPPPPXXXFXPPPPP- 956
KKK PPP PP + P S P ++ PPPP PPP
Sbjct: 1277 KKKPPLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQM 1336
Query: 957 --XXGGGXXKKXXXXFPP 1004
GG FPP
Sbjct: 1337 YRDRSGGGGGSMRGGFPP 1354
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 888 PXKKKRXXXPPPPXXXFXPPPPP 956
P + + PPPP PPPPP
Sbjct: 782 PPRLQGGIPPPPPLGIIPPPPPP 804
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 897 KKRXXXPPPPXXXFXPPPPP 956
++ PPPP PPPPP
Sbjct: 462 RREHVAPPPPPVVIPPPPPP 481
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 897 KKRXXXPPPPXXXFXPPPPP 956
++ PPPP PPPPP
Sbjct: 642 RREHVAPPPPPVVIPPPPPP 661
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 897 KKRXXXPPPPXXXFXPPPPP 956
++ PPPP PPPPP
Sbjct: 659 RREHVAPPPPPVVIPPPPPP 678
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 897 KKRXXXPPPPXXXFXPPPPP 956
++ PPPP PPPPP
Sbjct: 714 RREHVAPPPPPVVIPPPPPP 733
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 807 FFFPPPPXXXPPXFFXFXKKXXXXPXSPXKKKRXXXPPPPXXXFXPPPPP 956
F PPPP PP + P + PP P PPPPP
Sbjct: 321 FILPPPP---PPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPP 367
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 897 KKRXXXPPPPXXXFXPPPPP 956
++ PPPP PPPPP
Sbjct: 714 RREHVAPPPPPVVIPPPPPP 733
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -3
Query: 955 GGGGGXXXXXGGGGXXXLFFFXGEXGXXXXFFXXXKKXGGXXXGGGG 815
GGGGG GGGG G G + GG GGG
Sbjct: 330 GGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGG 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,331,759
Number of Sequences: 27780
Number of extensions: 283002
Number of successful extensions: 2225
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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