Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_C13
         (933 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1454 + 26652397-26652501,26653014-26653156,26654013-26654061     46   3e-05
03_03_0057 - 14132854-14133012,14133724-14133837,14134306-14134413     37   0.026
10_08_0968 + 21933627-21933785,21933893-21933943,21934094-219341...    32   0.57 

>07_03_1454 + 26652397-26652501,26653014-26653156,26654013-26654061
          Length = 98

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 24/41 (58%), Positives = 27/41 (65%)
 Frame = +2

Query: 101 PXQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKI 223
           P  +  GD VLLPEYGG +V L   EKEY LFRE DIL  +
Sbjct: 57  PVALKEGDTVLLPEYGGLEVKLA-AEKEYLLFREHDILGTL 96


>03_03_0057 - 14132854-14133012,14133724-14133837,14134306-14134413
          Length = 126

 Score = 36.7 bits (81), Expect = 0.026
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +2

Query: 101 PXQVSVGDKVLLPEYGGTKVSLENDEKEY 187
           P  +  GD VLLPEYGGT+V L   EKEY
Sbjct: 96  PVSLKEGDTVLLPEYGGTEVKLA--EKEY 122


>10_08_0968 +
           21933627-21933785,21933893-21933943,21934094-21934129,
           21935011-21935076,21935163-21935210,21936424-21936453,
           21936651-21936719
          Length = 152

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 107 QVSVGDKVLLPEYGGTKVSLENDEKEYHLF-RESDILAKIE 226
           +V  G KVL  +    +V L  DEK  H F RESD+LA +E
Sbjct: 114 EVEAGKKVLFSDINAYEVDLGTDEK--HCFCRESDLLAVVE 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,028,376
Number of Sequences: 37544
Number of extensions: 234332
Number of successful extensions: 371
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)