Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_C12
(1092 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.012
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.012
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 27 0.19
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.36
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 33 0.36
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 27 0.81
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 27 0.81
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 1.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 1.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 1.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.9
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 2.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.5
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 30 3.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 24 4.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 24 4.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 24 4.1
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 26 4.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.4
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 7.7
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 7.7
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 25 8.3
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 25 8.3
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.9 bits (74), Expect = 0.20
Identities = 23/90 (25%), Positives = 23/90 (25%)
Frame = -2
Query: 869 PPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXXXX 690
PPP PPPPPP G P
Sbjct: 558 PPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAV--------- 608
Query: 689 PPPPPXXXXXXFFFXKXXGGXPPPXXXPPP 600
PPPPP F PPP PPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPP 638
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXG 795
PPPPP PPPPPP G
Sbjct: 633 PPPPPPMGLPAVGAGAPPPPPPPPPSG 659
Score = 30.3 bits (65), Expect(2) = 0.012
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPP 635
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPP 636
Score = 26.6 bits (56), Expect(2) = 0.012
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 689 PPPPPXXXXXXFFFXKXXGGXPPPXXXPPP 600
PPPPP G PPP PPP
Sbjct: 630 PPPPPPPPPMGL--PAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.9 bits (74), Expect = 0.20
Identities = 23/90 (25%), Positives = 23/90 (25%)
Frame = -2
Query: 869 PPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXXXX 690
PPP PPPPPP G P
Sbjct: 384 PPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAV--------- 434
Query: 689 PPPPPXXXXXXFFFXKXXGGXPPPXXXPPP 600
PPPPP F PPP PPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPP 464
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXG 795
PPPPP PPPPPP G
Sbjct: 459 PPPPPPMGLPAVGAGAPPPPPPPPPSG 485
Score = 30.3 bits (65), Expect(2) = 0.012
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPP 461
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPP 462
Score = 26.6 bits (56), Expect(2) = 0.012
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 689 PPPPPXXXXXXFFFXKXXGGXPPPXXXPPP 600
PPPPP G PPP PPP
Sbjct: 456 PPPPPPPPPMGL--PAVGAGAPPPPPPPPP 483
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 26.6 bits (56), Expect(2) = 0.19
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 1019 GGGGGGXXXXPPPXXPPP 966
GGGGGG P PPP
Sbjct: 26 GGGGGGCAPAAPACAPPP 43
Score = 26.2 bits (55), Expect(2) = 0.19
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXG 795
PPPPP PPPPPP G
Sbjct: 41 PPPPPMCGCA----PPPPPPPPPPMCG 63
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 33.1 bits (72), Expect = 0.36
Identities = 28/105 (26%), Positives = 28/105 (26%), Gaps = 8/105 (7%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXX 696
PPPPP PPPPPP G P
Sbjct: 488 PPPPPMPSIN---GHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPV 544
Query: 695 XX----PPPPPXXXXXXF----FFXKXXGGXPPPXXXPPPXFFFF 585
PPPPP K G PPP PPP F F
Sbjct: 545 GMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMF 589
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 634 GGPPPXXXPPPXXFFF 587
GGPPP PPP F F
Sbjct: 574 GGPPPPPPPPPPSFMF 589
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 33.1 bits (72), Expect = 0.36
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 965 GVGGXXGGXGXXXPPPPPPXXXXXG 1039
G GG GG G PPPPPP G
Sbjct: 32 GCGGGGGGGGCCAPPPPPPVCGGCG 56
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 1019 GGGGGGXXXXPPPXXPPP 966
GGGGGG PPP PPP
Sbjct: 35 GGGGGGGCCAPPP--PPP 50
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.5 bits (58), Expect(2) = 0.81
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPP 807
PPPPP PPPPP
Sbjct: 676 PPPPPPMPGDLSSLLAAAPPPPP 698
Score = 23.0 bits (47), Expect(2) = 0.81
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 1016 GGGGGXXXXPPPXXPPP 966
GG GG PPP P P
Sbjct: 667 GGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.5 bits (58), Expect(2) = 0.81
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPP 807
PPPPP PPPPP
Sbjct: 676 PPPPPPMPGDLSSLLAAAPPPPP 698
Score = 23.0 bits (47), Expect(2) = 0.81
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 1016 GGGGGXXXXPPPXXPPP 966
GG GG PPP P P
Sbjct: 667 GGLGGFMPPPPPPPPMP 683
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 27.1 bits (57), Expect(2) = 1.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 967 GGGXXGGGXXXXPPPPP 1017
GGG GGG PPP P
Sbjct: 62 GGGGCGGGGGCAPPPAP 78
Score = 23.0 bits (47), Expect(2) = 1.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 808 GGGGGXXXXXXKXXXXXXGGGGG 876
GGGGG GGGGG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGG 65
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 27.1 bits (57), Expect(2) = 1.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 967 GGGXXGGGXXXXPPPPP 1017
GGG GGG PPP P
Sbjct: 62 GGGGCGGGGGCAPPPAP 78
Score = 23.0 bits (47), Expect(2) = 1.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 808 GGGGGXXXXXXKXXXXXXGGGGG 876
GGGGG GGGGG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGG 65
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 965 GVGGXXGGXGXXXPPPPPP 1021
G GG G G PPPPPP
Sbjct: 41 GCGGGGGCGGGCAPPPPPP 59
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 965 GVGGXXGGXGXXXPPPPPP 1021
G GG G G PPPPPP
Sbjct: 98 GCGGGGGCGGGCAPPPPPP 116
Score = 26.6 bits (56), Expect(2) = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 796 PXXGGGGGGXXXXXXKXXXXXXGGGGG 876
P GGGGGG GGGGG
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGGGGG 47
Score = 22.6 bits (46), Expect(2) = 1.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 967 GGGXXGGGXXXXPPPPPPXXXXXG 1038
GG GGG PPPP G
Sbjct: 40 GGCGGGGGCGGGCAPPPPPPACGG 63
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 967 GGGXXGGGXXXXPPPPPP 1020
G G GGG PPPPPP
Sbjct: 200 GSGGSGGGSGRFPPPPPP 217
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 965 GVGGXXGGXGXXXPPPPP 1018
G GG GG G PPPPP
Sbjct: 200 GSGGSGGGSGRFPPPPPP 217
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXG 795
PPPPP PPPPPP G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLG 587
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 965 GVGGXXGGXGXXXPPPPPP 1021
G G GG G PPPPPP
Sbjct: 28 GYSGGGGGGGDAAPPPPPP 46
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 1019 GGGGGGXXXXPPPXXPPP 966
GGGGGG PPP PPP
Sbjct: 31 GGGGGGGDAAPPP--PPP 46
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPP 90
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPP 92
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPP 93
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPP 91
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 965 GVGGXXGGXGXXXPPPPPP 1021
G G GG G PPPPPP
Sbjct: 25 GEAGYSGGAGVEAPPPPPP 43
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 872 PPPPXXXXXFXXXXXXXPPPPPP 804
PPPP F PPPPPP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPP 68
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = -2
Query: 1010 GGGXXXXPPPXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXXXXXFXXXX 831
GG PPP PPP PPPPP
Sbjct: 20 GGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPP--------PP 71
Query: 830 XXXPPPPPP 804
PPPPPP
Sbjct: 72 PMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXX 696
PPPPP PPPPPP G P
Sbjct: 728 PPPPPGGLPPI----TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 695 XXPPPPP 675
PPPPP
Sbjct: 784 PPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXX 696
PPPPP PPPPPP G P
Sbjct: 728 PPPPPGGLPPI----TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 695 XXPPPPP 675
PPPPP
Sbjct: 784 PPPPPPP 790
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 872 PPPPXXXXXFXXXXXXXPPPPPP 804
PPPP F PPPPPP
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPP 77
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPP 78
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXX 696
PPPPP PPPPPP G P
Sbjct: 311 PPPPPGGLPPI----TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 695 XXPPPPP 675
PPPPP
Sbjct: 367 PPPPPPP 373
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 689 PPPPPXXXXXXFFFXKXXGGXPPPXXXPPP 600
PPPPP G PPP PPP
Sbjct: 234 PPPPPLPPVGA-------GAPPPPPPPPPP 256
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PP PP PPPPP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 689 PPPPPXXXXXXFFFXKXXGGXPPPXXXPPP 600
PPPPP G PPP PPP
Sbjct: 220 PPPPPLPPVGA-------GAPPPPPPPPPP 242
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PP PP PPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPP 224
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 689 PPPPPXXXXXXFFFXKXXGGXPPPXXXPPP 600
PPPPP G PPP PPP
Sbjct: 220 PPPPPLPPVGA-------GAPPPPPPPPPP 242
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PP PP PPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPP 224
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like (grd
related) protein29 protein.
Length = 172
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 967 GGGXXGGGXXXXPPPPPPXXXXXG 1038
GG GGG PPPPP G
Sbjct: 53 GGCGYGGGYGCGIPPPPPPPPQCG 76
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 808 GGGGGXXXXXXKXXXXXXGGGGG 876
GGGGG GGGGG
Sbjct: 32 GGGGGCGGGGGCGGGCGYGGGGG 54
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 489 PPPPPPLPPIATPSSVPPPPPPPP 512
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = -2
Query: 989 PPPXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXXXXXFXXXXXXXPPPP 810
PP PPP PPPPP PPPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 809 PP 804
PP
Sbjct: 321 PP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = -2
Query: 989 PPPXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXXXXXFXXXXXXXPPPP 810
PP PPP PPPPP PPPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 809 PP 804
PP
Sbjct: 331 PP 332
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPP 519
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPP 520
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPP 1362
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPP 804
PPPPP PPPPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = -2
Query: 989 PPPXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPXXXXXFXXXXXXXPPPP 810
PPP PPP PPPPP F PPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPL----FSPSMILPPPPP 1394
Query: 809 P 807
P
Sbjct: 1395 P 1395
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.4
Identities = 24/95 (25%), Positives = 24/95 (25%), Gaps = 3/95 (3%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXX 696
PPPPP PPPPP P
Sbjct: 239 PPPPPKGSPPL--AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 695 XXPPPPPXXXXXXFFF-XKXXGGXPPP--XXXPPP 600
PPPPP GG PPP PPP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.4
Identities = 24/95 (25%), Positives = 24/95 (25%), Gaps = 3/95 (3%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXX 696
PPPPP PPPPP P
Sbjct: 260 PPPPPKGSPPL--AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 695 XXPPPPPXXXXXXFFF-XKXXGGXPPP--XXXPPP 600
PPPPP GG PPP PPP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 4.4
Identities = 24/95 (25%), Positives = 24/95 (25%), Gaps = 3/95 (3%)
Frame = -2
Query: 875 PPPPPXXXXXFXXXXXXXPPPPPPXXGXXXXXXXXPXKXXXXXXXXXXXXXXXXXXXXXX 696
PPPPP PPPPP P
Sbjct: 245 PPPPPKGSPPL--AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 695 XXPPPPPXXXXXXFFF-XKXXGGXPPP--XXXPPP 600
PPPPP GG PPP PPP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 634 GGPPPXXXPPPXXFF 590
GGPPP PPP FF
Sbjct: 1010 GGPPPPPPPPPADFF 1024
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 634 GGPPPXXXPPPXXFF 590
GGPPP PPP FF
Sbjct: 249 GGPPPPPPPPPADFF 263
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 24.6 bits (51), Expect(2) = 8.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 970 GGXXGGGXXXXPPPPPPXXXXXG 1038
GG GGG P PP P G
Sbjct: 632 GGGGGGGPTGPPAPPKPPAKPRG 654
Score = 22.2 bits (45), Expect(2) = 8.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 805 GGGGGGXXXXXXKXXXXXXGGGGG 876
GGG GG GGGGG
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGG 638
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 24.6 bits (51), Expect(2) = 8.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 970 GGXXGGGXXXXPPPPPPXXXXXG 1038
GG GGG P PP P G
Sbjct: 632 GGGGGGGPTGPPAPPKPPAKPRG 654
Score = 22.2 bits (45), Expect(2) = 8.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 805 GGGGGGXXXXXXKXXXXXXGGGGG 876
GGG GG GGGGG
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGG 638
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.155 0.532
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,283,167
Number of Sequences: 27780
Number of extensions: 356363
Number of successful extensions: 5952
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2642
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2939888878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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