Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_C11
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0327 + 22359524-22359602,22359732-22359835,22362073-223622...    28   8.0  

>09_06_0327 +
           22359524-22359602,22359732-22359835,22362073-22362272,
           22362359-22362459,22362551-22363005,22363079-22363645
          Length = 501

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 34  LRFLTLLCVAVRFASPPHSVSRQYIMAAKFVVLFACIAL 150
           LR L+LLC  + FA     +SR+Y    + V L+   AL
Sbjct: 406 LRLLSLLCFGLLFARRYADLSRKYSFVMQLVDLYGPFAL 444


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,469,396
Number of Sequences: 37544
Number of extensions: 241932
Number of successful extensions: 719
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)