Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_C11
         (834 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2213|AAS65346.1| 1016|Drosophila melanogaster CG8948-PF...    30   4.5  
AE014298-2212|AAS65345.1| 1016|Drosophila melanogaster CG8948-PE...    30   4.5  
AE014298-2211|AAS65344.1| 1016|Drosophila melanogaster CG8948-PD...    30   4.5  
AE014298-2210|AAS65343.1| 1016|Drosophila melanogaster CG8948-PC...    30   4.5  
AE014298-2209|AAS65342.1| 1016|Drosophila melanogaster CG8948-PB...    30   4.5  
AE014298-2208|AAF48506.3| 1016|Drosophila melanogaster CG8948-PA...    30   4.5  

>AE014298-2213|AAS65346.1| 1016|Drosophila melanogaster CG8948-PF,
           isoform F protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +1

Query: 175 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAXXXQG 354
           D+PDF +++  H KE   T  Q    + + KD    +K      + +   LN F     G
Sbjct: 22  DSPDFRENLNRHEKELDHTSHQIKRIIKEVKDLMSAAKILSTRMKQLAILLNDFNFECIG 81

Query: 355 SARXXER----EXQXXFGTVXAKXE 417
           +A+  +     E    FG +    E
Sbjct: 82  TAQTDDENVICESLKRFGAIIGNIE 106


>AE014298-2212|AAS65345.1| 1016|Drosophila melanogaster CG8948-PE,
           isoform E protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +1

Query: 175 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAXXXQG 354
           D+PDF +++  H KE   T  Q    + + KD    +K      + +   LN F     G
Sbjct: 22  DSPDFRENLNRHEKELDHTSHQIKRIIKEVKDLMSAAKILSTRMKQLAILLNDFNFECIG 81

Query: 355 SARXXER----EXQXXFGTVXAKXE 417
           +A+  +     E    FG +    E
Sbjct: 82  TAQTDDENVICESLKRFGAIIGNIE 106


>AE014298-2211|AAS65344.1| 1016|Drosophila melanogaster CG8948-PD,
           isoform D protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +1

Query: 175 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAXXXQG 354
           D+PDF +++  H KE   T  Q    + + KD    +K      + +   LN F     G
Sbjct: 22  DSPDFRENLNRHEKELDHTSHQIKRIIKEVKDLMSAAKILSTRMKQLAILLNDFNFECIG 81

Query: 355 SARXXER----EXQXXFGTVXAKXE 417
           +A+  +     E    FG +    E
Sbjct: 82  TAQTDDENVICESLKRFGAIIGNIE 106


>AE014298-2210|AAS65343.1| 1016|Drosophila melanogaster CG8948-PC,
           isoform C protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +1

Query: 175 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAXXXQG 354
           D+PDF +++  H KE   T  Q    + + KD    +K      + +   LN F     G
Sbjct: 22  DSPDFRENLNRHEKELDHTSHQIKRIIKEVKDLMSAAKILSTRMKQLAILLNDFNFECIG 81

Query: 355 SARXXER----EXQXXFGTVXAKXE 417
           +A+  +     E    FG +    E
Sbjct: 82  TAQTDDENVICESLKRFGAIIGNIE 106


>AE014298-2209|AAS65342.1| 1016|Drosophila melanogaster CG8948-PB,
           isoform B protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +1

Query: 175 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAXXXQG 354
           D+PDF +++  H KE   T  Q    + + KD    +K      + +   LN F     G
Sbjct: 22  DSPDFRENLNRHEKELDHTSHQIKRIIKEVKDLMSAAKILSTRMKQLAILLNDFNFECIG 81

Query: 355 SARXXER----EXQXXFGTVXAKXE 417
           +A+  +     E    FG +    E
Sbjct: 82  TAQTDDENVICESLKRFGAIIGNIE 106


>AE014298-2208|AAF48506.3| 1016|Drosophila melanogaster CG8948-PA,
           isoform A protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +1

Query: 175 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAXXXQG 354
           D+PDF +++  H KE   T  Q    + + KD    +K      + +   LN F     G
Sbjct: 22  DSPDFRENLNRHEKELDHTSHQIKRIIKEVKDLMSAAKILSTRMKQLAILLNDFNFECIG 81

Query: 355 SARXXER----EXQXXFGTVXAKXE 417
           +A+  +     E    FG +    E
Sbjct: 82  TAQTDDENVICESLKRFGAIIGNIE 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,979,146
Number of Sequences: 53049
Number of extensions: 398594
Number of successful extensions: 1091
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)