Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_C06
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          153   2e-37
11_01_0155 - 1287003-1287452                                          153   2e-37
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    39   0.006
03_06_0097 - 31632238-31632525,31633386-31633769                       37   0.023
07_03_0227 - 15398371-15398925                                         30   2.0  
01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309     30   2.6  

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  153 bits (371), Expect = 2e-37
 Identities = 66/107 (61%), Positives = 89/107 (83%)
 Frame = +3

Query: 117 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 296
           GRKKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F  +D+R+ V+
Sbjct: 17  GRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVR 76

Query: 297 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 437
           GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LL
Sbjct: 77  GGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLL 123



 Score = 37.9 bits (84), Expect = 0.010
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 455 RCEPKKFGGPGARARYQ 505
           RCEPKKFGG GARAR+Q
Sbjct: 129 RCEPKKFGGRGARARFQ 145


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  153 bits (371), Expect = 2e-37
 Identities = 66/107 (61%), Positives = 89/107 (83%)
 Frame = +3

Query: 117 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 296
           GRKKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F  +D+R+ V+
Sbjct: 17  GRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVR 76

Query: 297 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 437
           GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LL
Sbjct: 77  GGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLL 123



 Score = 37.9 bits (84), Expect = 0.010
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 455 RCEPKKFGGPGARARYQ 505
           RCEPKKFGG GARAR+Q
Sbjct: 129 RCEPKKFGGRGARARFQ 145


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 26/80 (32%), Positives = 39/80 (48%)
 Frame = +3

Query: 114 SGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 293
           +G++K + A  + + G G   VN +  D   P +L ++          +     D+  TV
Sbjct: 294 TGKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTV 352

Query: 294 KGGGHVAQVYAIRQAISKAL 353
           KGGG   QV AIR  IS+AL
Sbjct: 353 KGGGVSGQVGAIRLGISRAL 372


>03_06_0097 - 31632238-31632525,31633386-31633769
          Length = 223

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +3

Query: 114 SGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFSMVDIR 284
           +GR+KTA A    + G G + +N R         P  ++Y  + P++ LG E  +  D+ 
Sbjct: 101 TGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEY-CKVPLVTLGFE--NSYDVF 157

Query: 285 VTVKGGGHVAQVYAIRQAISKALI 356
           V V GGG   Q  AI   +++AL+
Sbjct: 158 VKVHGGGLSGQAQAICLGVARALV 181


>07_03_0227 - 15398371-15398925
          Length = 184

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -1

Query: 237 VPEVCTAAVWAQPSPMGARLHAAFH--DHACNTQLRWRF 127
           +P +C A  W  P+   A  H  FH     C+ + RW +
Sbjct: 23  LPPLCRAPWWPSPASSAAATHLRFHPRHRRCHPRRRWSY 61


>01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309
          Length = 330

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = -2

Query: 284 SDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGGGFLTSRILG 105
           +D +  E  + E   +FL+   Q +  +  +W  +YT +S++ LA+ N     L  R+L 
Sbjct: 210 NDDHLSEELINEMVMKFLEQTKQDNWSSGNEWPQMYTDYSISKLAV-NAYTRLLARRLLD 268

Query: 104 RP 99
           RP
Sbjct: 269 RP 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,231,313
Number of Sequences: 37544
Number of extensions: 437847
Number of successful extensions: 1129
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)