Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_C02
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 170 1e-42
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 147 9e-36
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 129 3e-30
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 128 4e-30
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 105 5e-23
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 95 6e-20
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 95 6e-20
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 95 6e-20
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 87 2e-17
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 84 1e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 79 3e-15
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 79 3e-15
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 79 3e-15
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 79 6e-15
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 79 6e-15
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 75 1e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 75 1e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 74 2e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 74 2e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 74 2e-13
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 70 3e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 68 1e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 68 1e-11
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 62 4e-10
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 62 4e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 61 1e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 60 2e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 60 2e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 60 3e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 60 3e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 58 7e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 58 7e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 56 5e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 52 6e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 50 2e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 40 0.003
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.003
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.17
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.22
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 33 0.38
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.38
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 32 0.67
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 31 0.89
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 31 0.89
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.6
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.6
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 3.6
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 6.3
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 6.3
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 170 bits (413), Expect = 1e-42
Identities = 87/212 (41%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Frame = +2
Query: 299 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 478
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 479 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 658
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 659 XIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKXXQP-GTWKGSRN 835
+RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K Q +G
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDI 255
Query: 836 SHCYSR*IIDFLGKGPTNLXG-AXIXLDXAXR 928
++DFL G TN+ + + LD A R
Sbjct: 256 VVATPGRLLDFLDNGTTNMKKCSYLVLDEADR 287
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 147 bits (357), Expect = 9e-36
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Frame = +2
Query: 311 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 490
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 491 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRR 670
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 671 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKXXQPGTW--KGSRNSHC 844
G+GP+A+++ PTRELA Q+ Q A F + C +GG K Q +G+ C
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVC 395
Query: 845 YSR*IIDFLGKGPTN-LXGAXIXLDXAXR 928
IID + G TN L + D A R
Sbjct: 396 TPGRIIDLVKMGATNFLRTTFLVFDEADR 424
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 129 bits (311), Expect = 3e-30
Identities = 64/165 (38%), Positives = 98/165 (59%), Gaps = 1/165 (0%)
Frame = +2
Query: 299 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 475
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 476 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 655
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 656 PXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
P + GDGPIA++LAPTRELA Q + A F ++ C +GG
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGG 414
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 128 bits (310), Expect = 4e-30
Identities = 61/139 (43%), Positives = 89/139 (64%), Gaps = 4/139 (2%)
Frame = +2
Query: 404 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 583
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 584 GVAQTGSGKTLAYILPAIVHINNQPXIRRGD----GPIALVLAPTRELAQQIQQVAADFG 751
GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 752 HTSYVRNTCVFGGAPKXXQ 808
++ V GGA + Q
Sbjct: 403 KLLGIKTVSVIGGASREDQ 421
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 105 bits (252), Expect = 5e-23
Identities = 54/139 (38%), Positives = 88/139 (63%), Gaps = 7/139 (5%)
Frame = +2
Query: 431 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 607
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 608 KTLAYILPAIVHINNQ-PXIRRGD-----GPIALVLAPTRELAQQIQQVAADFGHTSYVR 769
KTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + + Y +
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-K 192
Query: 770 NTCVFGGAPKXXQPGTWKG 826
+ C++GG + Q +G
Sbjct: 193 SVCLYGGGSRPEQVEACRG 211
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 95.1 bits (226), Expect = 6e-20
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Frame = +2
Query: 398 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 577
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 578 LVGVAQTGSGKTLAYILPAIVHI-NNQPXI---------RRGDGPIALVLAPTRELAQQI 727
L+ AQTGSGKT A++LP I HI P + RR P ALVL+PTRELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 728 QQVAADFGHTSYVRNTCVFGG 790
+ A F + S ++ ++GG
Sbjct: 239 HKEATKFSYKSNIQTAILYGG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 95.1 bits (226), Expect = 6e-20
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Frame = +2
Query: 398 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 577
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 578 LVGVAQTGSGKTLAYILPAIVHI-NNQPXI---------RRGDGPIALVLAPTRELAQQI 727
L+ AQTGSGKT A++LP I HI P + RR P ALVL+PTRELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 728 QQVAADFGHTSYVRNTCVFGG 790
+ A F + S ++ ++GG
Sbjct: 223 HKEATKFSYKSNIQTAILYGG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 95.1 bits (226), Expect = 6e-20
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Frame = +2
Query: 398 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 577
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 578 LVGVAQTGSGKTLAYILPAIVHI-NNQPXI---------RRGDGPIALVLAPTRELAQQI 727
L+ AQTGSGKT A++LP I HI P + RR P ALVL+PTRELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 728 QQVAADFGHTSYVRNTCVFGG 790
+ A F + S ++ ++GG
Sbjct: 220 HKEATKFSYKSNIQTAILYGG 240
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 87.0 bits (206), Expect = 2e-17
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +2
Query: 359 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 535
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 536 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---XIRRGDGPIALVLAPT 706
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 707 RELAQQI 727
RELA+QI
Sbjct: 276 RELARQI 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 84.2 bits (199), Expect = 1e-16
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Frame = +2
Query: 422 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 601
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 602 SGKTLAYILPAI----------VHIN-NQPXIRRGDGPIALVLAPTRELAQQIQQVAADF 748
SGKT A+++P + VH + R+ P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 749 GHTSYVRNTCVFGG 790
+ + + + ++GG
Sbjct: 274 AYRTPITSALLYGG 287
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 79.4 bits (187), Expect = 3e-15
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +2
Query: 452 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 631
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 632 AIVH-INNQPXIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ I++ G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 79.4 bits (187), Expect = 3e-15
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +2
Query: 452 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 631
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 632 AIVH-INNQPXIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ I++ G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 79.4 bits (187), Expect = 3e-15
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +2
Query: 452 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 631
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 632 AIVH-INNQPXIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ I++ G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 78.6 bits (185), Expect = 6e-15
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Frame = +2
Query: 452 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 631
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 632 AIVHINNQPXIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 78.6 bits (185), Expect = 6e-15
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Frame = +2
Query: 452 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 631
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 632 AIVHINNQPXIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/115 (33%), Positives = 65/115 (56%)
Frame = +2
Query: 446 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 625
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 626 LPAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/115 (33%), Positives = 65/115 (56%)
Frame = +2
Query: 446 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 625
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 626 LPAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 73.7 bits (173), Expect = 2e-13
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 644 INNQPXIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 73.7 bits (173), Expect = 2e-13
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 644 INNQPXIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 73.7 bits (173), Expect = 2e-13
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 644 INNQPXIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 69.7 bits (163), Expect = 3e-12
Identities = 36/91 (39%), Positives = 53/91 (58%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 644 INNQPXIRRGDGPIALVLAPTRELAQQIQQV 736
+ +P + LVL PTRELA Q+ QV
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 67.7 bits (158), Expect = 1e-11
Identities = 37/109 (33%), Positives = 60/109 (55%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 644 INNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
++ P G AL+L PTRELA QI + G ++ + + GG
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 67.7 bits (158), Expect = 1e-11
Identities = 37/109 (33%), Positives = 60/109 (55%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 644 INNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
++ P G AL+L PTRELA QI + G ++ + + GG
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 65.3 bits (152), Expect = 6e-11
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 7/116 (6%)
Frame = +2
Query: 482 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 646
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 647 --NNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKXXQ 808
+ + GP AL++APTREL QI + T+ + T + GG + Q
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQ 278
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 62.5 bits (145), Expect = 4e-10
Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +2
Query: 455 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 634
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 635 IVHINNQ-PXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ I+++ P ++ ALV+APTRELAQQIQ+V + G V GG
Sbjct: 88 LQRIDHEDPHVQ------ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGG 134
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 62.5 bits (145), Expect = 4e-10
Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +2
Query: 455 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 634
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 635 IVHINNQ-PXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ I+++ P ++ ALV+APTRELAQQIQ+V + G V GG
Sbjct: 88 LQRIDHEDPHVQ------ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGG 134
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 61.3 bits (142), Expect = 1e-09
Identities = 34/114 (29%), Positives = 62/114 (54%)
Frame = +2
Query: 449 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 628
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 629 PAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 60.5 bits (140), Expect = 2e-09
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Frame = +2
Query: 401 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 580
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 581 VGVAQTGSGKTLAYILPAIVHI-----NNQPXIRRGDGPIALVLAPTRELAQQIQQVAAD 745
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 746 FGHTSYVRNTCVFGG 790
+ + ++ FGG
Sbjct: 837 LTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 60.5 bits (140), Expect = 2e-09
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Frame = +2
Query: 401 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 580
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 581 VGVAQTGSGKTLAYILPAIVHI-----NNQPXIRRGDGPIALVLAPTRELAQQIQQVAAD 745
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 746 FGHTSYVRNTCVFGG 790
+ + ++ FGG
Sbjct: 837 LTYETGLKCGLAFGG 851
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/115 (32%), Positives = 56/115 (48%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 644 INNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKXXQ 808
+ + P LVL PTRELA QI Q G + + GG Q
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQ 155
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/99 (33%), Positives = 60/99 (60%)
Frame = +2
Query: 497 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGD 676
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 677 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 793
G ++++PTREL+ Q V ++ S + V GG+
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGS 178
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/112 (29%), Positives = 61/112 (54%)
Frame = +2
Query: 455 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 634
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 635 IVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 58.4 bits (135), Expect = 7e-09
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +2
Query: 491 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 655
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 656 PXIRRGDGPIALVLAPTRELAQQIQQ 733
R+ DGP+AL+LAPTRELA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 58.4 bits (135), Expect = 7e-09
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 644 INNQPXIRRGD-GPIALVLAPTRELAQQIQQV 736
+ + G GP A+++APT+EL QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 58.4 bits (135), Expect = 7e-09
Identities = 32/97 (32%), Positives = 55/97 (56%)
Frame = +2
Query: 500 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGDG 679
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 680 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
A+V+ PTRELA Q Q+ + ++ GG
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGG 148
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.0 bits (134), Expect = 9e-09
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Frame = +2
Query: 371 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 550
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 551 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPXIRRGDGP--IALVLAPTREL 715
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 716 AQQ 724
A Q
Sbjct: 217 AAQ 219
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 55.6 bits (128), Expect = 5e-08
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Frame = +2
Query: 518 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPXIRRGD 676
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 677 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKXXQ 808
GP AL++APTREL QI + T+ + T + GG + Q
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQ 111
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +2
Query: 497 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGD 676
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P + +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKW-SPDY 147
Query: 677 GPIALVLAPTRELAQQ 724
G AL+++PTRELA Q
Sbjct: 148 GLGALIISPTRELALQ 163
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 52.0 bits (119), Expect = 6e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 455 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 628
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 629 PAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFG 751
+ I+ P + LAPT ELA+QI +V G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 52.0 bits (119), Expect = 6e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 455 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 628
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 629 PAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFG 751
+ I+ P + LAPT ELA+QI +V G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 52.0 bits (119), Expect = 6e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 455 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 628
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 629 PAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFG 751
+ I+ P + LAPT ELA+QI +V G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/112 (25%), Positives = 58/112 (51%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 644 INNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 799
+++ R +++ PTRE++ QI++ T + V G A K
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHK 130
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/112 (25%), Positives = 58/112 (51%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 643
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 644 INNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 799
+++ R +++ PTRE++ QI++ T + V G A K
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHK 130
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.4 bits (110), Expect = 7e-06
Identities = 36/112 (32%), Positives = 54/112 (48%)
Frame = +2
Query: 455 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 634
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 635 IVHINNQPXIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 790
+ I N G AL+L+P+REL QI V F + V GG
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGG 117
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/95 (25%), Positives = 47/95 (49%)
Frame = +2
Query: 497 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGD 676
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 677 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 781
++LAP R +AQ+ + G V TC+
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 464 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 631
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +2
Query: 554 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQ 733
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVD 206
Query: 734 VAADFGHTSYVRNTCVFGGA 793
+ S V GA
Sbjct: 207 EFKRWNDESGVAKVVSLSGA 226
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 560 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 655
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 572 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---XIRRGDGPIALVLAPTRELAQQI 727
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 536 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPXIRRG--DGPIALVLAP 703
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 704 TRELAQQI 727
T L Q+
Sbjct: 79 TSALVDQL 86
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 515 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGDGPIAL 691
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 692 VLAPTRELAQQI 727
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.67
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 536 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPXI--RRGDGPIALVLAP 703
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 704 TRELAQQI 727
T L Q+
Sbjct: 179 TSALVDQL 186
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 557 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQV 736
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 737 AADFGHTSYVRNTCVFGGA 793
A+ + +V +T + G+
Sbjct: 359 ASISSYLDHVYHTQIIQGS 377
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 557 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGDGPIALVLAPTRELAQQIQQV 736
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 737 AADFGHTSYVRNTCVFGGA 793
A+ + +V +T + G+
Sbjct: 359 ASISSYLDHVYHTQIIQGS 377
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 533 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 640
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 533 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 640
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 165 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 281
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 596 TGSGKTLAYILPAIVH 643
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 577 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 398
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 397 D 395
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 577 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 398
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 397 D 395
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 220 RRIIAEFVASSKFGTTVSTAIIPV 149
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 220 RRIIAEFVASSKFGTTVSTAIIPV 149
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 515 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPXIRRGDGPIAL 691
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 692 ------VLAPTRELAQQI 727
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,751,294
Number of Sequences: 27780
Number of extensions: 427447
Number of successful extensions: 1244
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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