Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_C01
         (953 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   2.1  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   7.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.8  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.2 bits (45), Expect(2) = 2.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 592  GGGGGGGXXK 621
            GGGGGGG  K
Sbjct: 1495 GGGGGGGGGK 1504



 Score = 21.4 bits (43), Expect(2) = 2.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 580  GXFXGGGGGGG 612
            G   GGGGGGG
Sbjct: 1493 GAGGGGGGGGG 1503


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = -2

Query: 610 PPPPPPXKKXPXXXXXGGXXPPPPXXXFFL 521
           P P P  +  P     G   PPPP    F+
Sbjct: 435 PRPLPSQEASPSGEQPGRMGPPPPTGRLFV 464


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
           GGGG   P      G   G  GGGG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGG 864


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,920
Number of Sequences: 2352
Number of extensions: 6524
Number of successful extensions: 153
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)