Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_C01
(953 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.13
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.13
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 33 0.40
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 33 0.40
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.53
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.53
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.53
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 32 0.70
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.70
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.70
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.70
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 32 0.70
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.7
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 4.9
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 4.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPPXXXF 527
PPPPPP + P G PPPP F
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP + P GG PPPP
Sbjct: 334 PPPPPPGMRYP-----GGMPPPPP 352
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP + P G PPPP
Sbjct: 317 PPPPPPSRFGP-PGMGGMPPPPPP 339
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 604 PPPPXKKXPXXXXXGGXXPPPP 539
PPPP + P G PPPP
Sbjct: 364 PPPPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPPXXXF 527
PPPPPP + P G PPPP F
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP + P GG PPPP
Sbjct: 344 PPPPPPGMRYP-----GGMPPPPP 362
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP + P G PPPP
Sbjct: 327 PPPPPPSRFGP-PGMGGMPPPPPP 349
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 604 PPPPXKKXPXXXXXGGXXPPPP 539
PPPP + P G PPPP
Sbjct: 374 PPPPPSRPPAPPSGHGMIPPPP 395
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP P G PPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPP 793
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP P G PPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPP 793
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPP 541
PPPPPP K P G PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPP 259
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 607 PPPPPXKKXPXXXXXGGXXPPPP 539
PPPPP K G PPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPP 259
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 606 PPPPPXKXXPXXXXXGXKXPPPP 538
PPPPP P G PPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPP 541
PPPPPP K P G PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPP 280
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 607 PPPPPXKKXPXXXXXGGXXPPPP 539
PPPPP K G PPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPP 280
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 606 PPPPPXKXXPXXXXXGXKXPPPP 538
PPPPP P G PPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPP 541
PPPPPP K P G PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPP 265
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 607 PPPPPXKKXPXXXXXGGXXPPPP 539
PPPPP K G PPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPP 265
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 606 PPPPPXKXXPXXXXXGXKXPPPP 538
PPPPP P G PPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPP 308
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 528 KXXXGGGGXXPPXXXXXGXFFXGGGGGG 611
K GGGG P G FF GGGG G
Sbjct: 95 KMGGGGGGGHDPFSSFFGDFFGGGGGHG 122
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG P G F GGGGG G
Sbjct: 98 GGGGGGHDPFSSFFGDFFGGGGGHG 122
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPPXXXF 527
PPPPPP P GG PPPP F
Sbjct: 769 PPPPPPP---PPGGFKGGPPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P G PPPP
Sbjct: 726 PPPPPPPGGLP-PITGGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPPXXXF 527
PPPPPP P GG PPPP F
Sbjct: 769 PPPPPPP---PPGGFKGGPPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P G PPPP
Sbjct: 726 PPPPPPPGGLP-PITGGPPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPPXXXF 527
PPPPPP P GG PPPP F
Sbjct: 352 PPPPPPP---PPGGFKGGPPPPPPPGMF 376
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPP 348
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P G PPPP
Sbjct: 309 PPPPPPPGGLP-PITGGPPPPPPP 331
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 0.70
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 607 PPPPPXKKXPXXXXXGGXXPPPP 539
PPPPP P GG PPPP
Sbjct: 34 PPPPPACAPPPAPACGGGAPPPP 56
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPP 542
PPPPP P GG PPP
Sbjct: 34 PPPPPACAPPPAPACGGGAPPPP 56
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP +K GG PPPP
Sbjct: 122 PPPPPPPRK----SRAGGSSPPPP 141
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P PPPP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPP 655
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP G PPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPP 653
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP G PPPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP + PPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPP 634
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P PPPP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPP 481
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP G PPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPP 479
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP G PPPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPPPP + PPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPP 460
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGGG G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCG 67
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGGG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCG 91
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGG GG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGG 68
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGG GG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGG 92
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGGG G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCG 67
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGGG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCG 91
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGG GG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGG 68
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG PP G GGGG GG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGG 92
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 609 PPPPPPXKXXPXXXXXGXKXPPPP 538
PPPPPP P PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPP 1361
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG P G GGGGGGG
Sbjct: 338 GGGGGGIPGQSVYMGAGGGGGGGGG 362
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 538 GGGGXFXPPXXXXXGXFXGGGGGGG 612
GGGG P G GGGGGGG
Sbjct: 232 GGGGGGIPGQSVYMGAGGGGGGGGG 256
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 607 PPPPPXKKXPXXXXXGGXXPPPPXXXFFLK 518
PPPPP P GG PPPP LK
Sbjct: 538 PPPPP----PVGMANGGPPPPPPLPLDLLK 563
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 541 GGGXFXPPXXXXXGXFXGGGGGG 609
GGG PP G GGGGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGG 71
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 541 GGGXFXPPXXXXXGXFXGGGGGG 609
GGG PP G GGGGGG
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGG 128
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 610 PPPPPPXKKXPXXXXXGGXXPPPP 539
PPPP P P G PPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPP 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,598,236
Number of Sequences: 27780
Number of extensions: 178933
Number of successful extensions: 3961
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2287
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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