Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_B22
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.06c |alg3||dolichol-P-Man dependent alpha|Schizosaccharo... 31 0.17
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 30 0.52
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 30 0.52
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 29 0.68
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.90
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 28 1.6
SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomy... 28 2.1
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 27 2.7
SPAC11E3.06 |map1||MADS-box transcription factor Map1|Schizosacc... 27 3.6
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.8
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 27 4.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 26 6.3
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 26 6.3
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 26 6.3
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 26 6.3
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 26 6.3
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 26 8.4
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 8.4
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 26 8.4
>SPAC7D4.06c |alg3||dolichol-P-Man dependent
alpha|Schizosaccharomyces pombe|chr 1|||Manual
Length = 406
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3
Query: 758 FRSLILICFARSFHFFDSFILRLFSSCFNHLFGNLFRFTIC 636
F +L+ ++ H FILRLF+ FN LF +LF + C
Sbjct: 131 FYIYVLLILSKRLHSI--FILRLFNDGFNSLFSSLFILSSC 169
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 29.9 bits (64), Expect = 0.52
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 282 VEQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVT 461
V+ DA + DA E+ KE D G +DA+ + E+ E + G
Sbjct: 180 VDWAVSKDAFEATTLKDASSEEEN-KEFVSDEGHSIVTEDASADSESEEEVDGHSEGKEL 238
Query: 462 NGESEQKAENGESVTTTPD 518
GESE++ N + V + D
Sbjct: 239 AGESEEEGSNVDDVEDSGD 257
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 29.9 bits (64), Expect = 0.52
Identities = 30/142 (21%), Positives = 50/142 (35%)
Frame = +3
Query: 393 EKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVTTTPDDGXXXXXXXXXXXWSLRS 572
++D I S KE VTN + G TT DDG +
Sbjct: 353 KRDGKRTTRPIPKSIAKE--DVTNSANSTAPSTG---TTVLDDGLDNNYEDIPLYGPSKD 407
Query: 573 ISFSRKDKPXXXXXXXXXXXXXNGEPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKT 752
+K++ +P +P+E T+ TVE V T ++ N+D+
Sbjct: 408 EELIKKEELEADTDLGLINTSEINQPANLPDEPTAETSNPVSATTVEAVTTTAD-NKDEE 466
Query: 753 PETPVTEPITNGHSTPETPQVE 818
VTE ++ + E ++
Sbjct: 467 KNDHVTEDVSQNSTIAEASSLQ 488
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 29.5 bits (63), Expect = 0.68
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +3
Query: 285 EQLADVDALKPQINGDAHIHEQ----TAKEKELDSGTPENEKDATTEKEAIENSNEKEAG 452
E++ D + P I D E AK E DS E D+T + + + EK +
Sbjct: 162 EEVFDTEITNPVIPADEDDDEYQDLPAAKRHEGDS-IKSTEHDSTLDSGVVIDGREKSSS 220
Query: 453 PVTNGESEQKAENGESVTTTPD 518
+ ESEQ AE + + D
Sbjct: 221 ELHEEESEQAAEGDTAKNSGTD 242
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 645 EPEKVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPE 758
EPE PE+ E + + +N+ VEE + + E PE
Sbjct: 384 EPESEPEDQDEPSEKDDENKDVEEEQEQEQEEEQIDPE 421
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 345 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKEA 449
+QT KEK++DS + ENE ++ + E S + ++
Sbjct: 108 QQTEKEKDVDSASAENESINSSSSSSKECSTQTQS 142
>SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 656
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +3
Query: 360 EKELDSGTPENEKDATTEKEAI--ENSNEKEAGPVTNGESEQKAENGESVTTTPD 518
E L + EN D +I EN N ++ VT E +EN S + PD
Sbjct: 54 ESNLPNNVAENTTDTPVNYGSIRDENHNSRKGKDVTLNSDEAHSENVPSTSEDPD 108
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 27.5 bits (58), Expect = 2.7
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +3
Query: 282 VEQLADVDALKPQINGDAH---IHEQTAKEKELDSG-TPEN--EKDAT-TEKEAIENSNE 440
V+ +VD+L+PQ N D H A E +D T N E D T + E I +N+
Sbjct: 320 VDYRDEVDSLRPQFNVDEQSSISHSSNASENIVDGAVTQANGIESDFTRVDHEPIIVNND 379
Query: 441 KEAGPVTNGESEQK 482
E G N ESE +
Sbjct: 380 DENG---NNESENE 390
>SPAC11E3.06 |map1||MADS-box transcription factor
Map1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 360 EKELDSGTPENEKDATTEKEAIENSNEKEAG-PVTNGESEQKAENGES 500
E +++ T +NE A+ K++ ++ E+G P+ + E ENG S
Sbjct: 94 ESLINATTDQNESQASQAKQSSAQLSDSESGYPLDHEEMRISEENGPS 141
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 26.6 bits (56), Expect = 4.8
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 285 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 464
EQ DV+ L ++ + T+KE D + EKE +E ++ E N
Sbjct: 6 EQTDDVETLMASLDQLGMEADPTSKEFNNDDSKIGAPSEVQDEKELLEFLDQLENDEEKN 65
Query: 465 GES--EQKAENGESVTTTPDD 521
++ E+ E ESV T ++
Sbjct: 66 EKNPIEEANEENESVAATSNE 86
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 345 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKA 485
E++ EKEL + + +D + EA++++NE+ + + E A
Sbjct: 251 EESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSA 297
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = +3
Query: 651 EKVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAA 830
E P+ E+T E++ + + SEA++ E EP+ P P E
Sbjct: 61 ENTPKNTFESTQTYENLESISKNEPTSEASKPLLNELVPEEPLPREPPLPNEPVPEEPLP 120
Query: 831 DQP 839
+P
Sbjct: 121 GEP 123
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 351 TAKEKELDSGTPEN--EKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVTTT 512
+ KEKE D + EN E A T +A EN + AG + E +G+S +T
Sbjct: 205 SGKEKENDKKSSENFDELLANTSAKAFEN-QKGSAGETKSEPKEADKGSGDSTKST 259
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 339 IHEQTAKEKELDSGTPENEKDATTEKEAIENSNE 440
IH+ + E++S + KDAT E N+NE
Sbjct: 53 IHKLSVSFPEVNSWEKDTNKDATVSYELSNNANE 86
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 321 INGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 464
+N DA++ EQ+ K E PE E++ K A NE V++
Sbjct: 297 VNSDANVVEQSEKTTEDADEEPETEENLDEFKPADGADNEDSKSLVSH 344
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 387 ENEKDATTEKEAIENSNEK-EAGPVTNGESEQKAENGESVTTT 512
ENE D +KE ++NS+ E G +++ ++ E E+ +++
Sbjct: 15 ENEGDQQFDKEVVQNSDSNIETGQISDSLTKAVEERAETESSS 57
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 363 KELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAE 488
KE+D E+EK + ++ ++ K+ TNG QKAE
Sbjct: 124 KEIDG---EDEKKSVGQESITGSAKRKDRRSKTNGSKRQKAE 162
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 729 SEANEDKTPETPVTEPITNGHSTPETPQV 815
+E+++D TP TP P+ T +P++
Sbjct: 188 TESDQDSTPATPFPMPMHLAEETATSPEI 216
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 26 IGNSLRFIFFFLGGDSIPPPYCVGLCVLEVNVLPIS 133
+ N + +FF +G + P CVG+ VL V PIS
Sbjct: 139 VNNQVYQVFFGVGNGN---PSCVGIAVLAVLPQPIS 171
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 669 VIEATAEQSQNETVEEVKTPSEANEDKTPETPVT 770
++EA +++S E++ E+ S+ + P T VT
Sbjct: 155 LVEADSQESDTESLPEINDSSDVSLSDLPSTNVT 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,003,565
Number of Sequences: 5004
Number of extensions: 52586
Number of successful extensions: 352
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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