Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_B15
(957 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 35 0.099
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.13
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.40
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.40
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 0.68
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 0.70
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.1
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 29 3.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 3.7
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 29 3.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 6.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.5
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 23 8.2
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 34.7 bits (76), Expect = 0.099
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP GG PPPP GG
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPGG 598
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP GG PPPP G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPG 597
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP + G PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPP 581
Score = 23.4 bits (48), Expect(2) = 8.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 559 PIPPPPPP 566
Score = 23.0 bits (47), Expect(2) = 8.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 867 PPPPPPXXXGGG 832
PPPPPP GG
Sbjct: 577 PPPPPPPPMLGG 588
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP GG PPPP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXG 485
PPPPP GG PPPP G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPP GG PPPP GG
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGG 750
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 547 PPPPPX--KRXXGGGXXPPPPXGG 482
PPPPP GG PPPP GG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP GG PPPP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXG 485
PPPPP GG PPPP G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPP GG PPPP GG
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGG 750
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 547 PPPPPX--KRXXGGGXXPPPPXGG 482
PPPPP GG PPPP GG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP GG PPPP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGG 317
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXG 485
PPPPP GG PPPP G
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPG 374
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPP GG PPPP GG
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGG 333
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 547 PPPPPX--KRXXGGGXXPPPPXGG 482
PPPPP GG PPPP GG
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGG 350
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.17
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP ++ GG PPPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPP 141
Score = 33.9 bits (74), Expect = 0.17
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP K GG PPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPP 142
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPP R G PPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPP 143
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP R GG PPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPPP 353
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP GG PPPP
Sbjct: 334 PPPPPPGMRYPGGMPPPPP 352
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G G PPPP
Sbjct: 349 PPPPPRYPSAGPGMYPPPP 367
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 547 PPPPPXKRXX--GGGXXPPPPXGG 482
PPPPP R G G PPPP G
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPG 340
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP R GG PPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPPP 363
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP GG PPPP
Sbjct: 344 PPPPPPGMRYPGGMPPPPP 362
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G G PPPP
Sbjct: 359 PPPPPRYPSAGPGMYPPPP 377
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 547 PPPPPXKRXX--GGGXXPPPPXGG 482
PPPPP R G G PPPP G
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPG 350
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.1 bits (57), Expect(2) = 0.68
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 867 PPPPPPXXXGGGG 829
PPPPPP G GG
Sbjct: 650 PPPPPPPPSGAGG 662
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 867 PPPPPPXXXGGGG 829
PPPPPP G G
Sbjct: 649 PPPPPPPPPSGAG 661
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 630 PPPPPPPP 637
Score = 23.4 bits (48), Expect(2) = 0.68
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 631 PPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.1 bits (57), Expect(2) = 0.70
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 867 PPPPPPXXXGGGG 829
PPPPPP G GG
Sbjct: 476 PPPPPPPPSGAGG 488
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 867 PPPPPPXXXGGGG 829
PPPPPP G G
Sbjct: 475 PPPPPPPPPSGAG 487
Score = 23.4 bits (48), Expect(2) = 0.70
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 435 PPPPPPPP 442
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 457 PPPPPPPP 464
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP GG PPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 488 PPPPPMPSINGHAPNPPPP 506
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 484 PPXGGGXXXPPPXXFXGGGGG 546
PP GG PPP F GG GG
Sbjct: 773 PPRGGMHHMPPPPSFRGGRGG 793
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPP + GG PPPP
Sbjct: 782 PPPPSFRGGRGGHGGPPPP 800
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 487 PXGGGXXXPPPXXFXGGGGGG 549
P GGG P P GGGGGG
Sbjct: 264 PMGGGGGYPQPPPQQGGGGGG 284
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 486 PXGGGGXXPPPXXLFXGGGGG 548
P GGGG P P GGGGG
Sbjct: 264 PMGGGGGYPQPPPQQGGGGGG 284
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 493 GGGXXXPPPXXFXGGGGGG 549
GGG PPP GGGG G
Sbjct: 268 GGGYPQPPPQQGGGGGGAG 286
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP GG PPPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPP 57
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPP 813
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 867 PPPPPPXXXGG 835
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
Score = 23.4 bits (48), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 765 PPPPPPPP 772
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPP 813
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPP 812
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 867 PPPPPPXXXGG 835
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
Score = 23.4 bits (48), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 765 PPPPPPPP 772
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 873 PXPPPPPPXXXGGGG 829
P PPPPPP GG G
Sbjct: 152 PLPPPPPPPLMGGSG 166
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = -3
Query: 547 PPPPPXKRXX---GGGXXPPPPXGG 482
PPPPP K G G PPPP G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAG 262
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP + G PPP GG
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = -3
Query: 547 PPPPPXKRXX---GGGXXPPPPXGG 482
PPPPP K G G PPPP G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAG 283
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP + G PPP GG
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = -3
Query: 547 PPPPPXKRXX---GGGXXPPPPXGG 482
PPPPP K G G PPPP G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAG 268
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPPXGG 482
PPPPP + G PPP GG
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGG 325
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 873 PXPPPPPPXXXGGG 832
P PPPPPP GGG
Sbjct: 63 PPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 873 PXPPPPPPXXXGGG 832
P PPPPPP GGG
Sbjct: 63 PPPPPPPPAPIGGG 76
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 867 PPPPPPXXXGGGG 829
PPPPPP GGGG
Sbjct: 34 PPPPPPSPCGGGG 46
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 873 PXPPPPPPXXXGGGG 829
P PPPP P GGGG
Sbjct: 31 PPPPPPSPCGCGGGG 45
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPP 252
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 544 PPPPXKRXXGGGXXPPPPXGG 482
PPP GGG PPPP G
Sbjct: 35 PPPACGNPCGGGFGPPPPPFG 55
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 547 PPPPPXKRXXGGGXXPPPP 491
PPPPP G PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP 238
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 23.4 bits (48), Expect(2) = 8.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 873 PXPPPPPP 850
P PPPPPP
Sbjct: 66 PPPPPPPP 73
Score = 23.4 bits (48), Expect(2) = 8.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 867 PPPPPPXXXGGG 832
PPPPPP G G
Sbjct: 67 PPPPPPPQCGCG 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,429,821
Number of Sequences: 27780
Number of extensions: 155445
Number of successful extensions: 3327
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2587
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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