Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_B13
(898 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1562|AAF48004.2| 281|Drosophila melanogaster CG18292-P... 107 3e-23
BT022646-1|AAY55062.1| 138|Drosophila melanogaster IP07032p pro... 51 2e-06
AE014134-2861|AAF53624.1| 206|Drosophila melanogaster CG15142-P... 51 2e-06
AY069656-1|AAL39801.1| 236|Drosophila melanogaster LD43057p pro... 42 0.002
AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD2387... 30 4.9
AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA... 30 4.9
BT003648-1|AAO39652.1| 938|Drosophila melanogaster AT11044p pro... 29 6.5
AE014298-3177|AAN09566.1| 938|Drosophila melanogaster CG14619-P... 29 6.5
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 29 8.6
>AE014298-1562|AAF48004.2| 281|Drosophila melanogaster CG18292-PA
protein.
Length = 281
Score = 107 bits (256), Expect = 3e-23
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = +1
Query: 379 ATISTVPASSPSSVGKDKDNGTSKYAQLLSVIEEMGKEVRPSYSGSRSSAERLKRGIVHA 558
A I+T S+ S NG +KYAQLL+VIEEMG+++RP+Y+GSRSS ERLKRGIVHA
Sbjct: 205 ANITTPLTSTASLPSVGPGNGLTKYAQLLAVIEEMGRDIRPTYTGSRSSTERLKRGIVHA 264
Query: 559 RILVRECLIETERSARQ 609
RILVRECL+ETER+ARQ
Sbjct: 265 RILVRECLMETERAARQ 281
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 262 MEAMDIQAVESKLSDVTVTAIPMS 333
M+ MDIQAVESKLSDVTVT IP S
Sbjct: 1 MDIMDIQAVESKLSDVTVTPIPRS 24
>BT022646-1|AAY55062.1| 138|Drosophila melanogaster IP07032p
protein.
Length = 138
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 412 SSVGKDKD-NGTSKYAQLLSVIEEMGKEVRPSYSGSRSSAERLKRGIVHARILVRECL 582
+S+G D++ N KY+ LL+V+ EM V + +G R+ ER++R I HAR+ VR+CL
Sbjct: 59 TSIGLDENANIVDKYSDLLNVLGEMRTNVPTTMAGLRAPKERMQRDIAHARLKVRQCL 116
>AE014134-2861|AAF53624.1| 206|Drosophila melanogaster CG15142-PA
protein.
Length = 206
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 412 SSVGKDKD-NGTSKYAQLLSVIEEMGKEVRPSYSGSRSSAERLKRGIVHARILVRECL 582
+S+G D++ N KY+ LL+V+ EM V + +G R+ ER++R I HAR+ VR+CL
Sbjct: 127 TSIGLDENANIVDKYSDLLNVLGEMRTNVPTTMAGLRAPKERMQRDIAHARLKVRQCL 184
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 262 MEAMDIQAVESKLSDVTVTAIPMSGK 339
M+ +DI++ S+ SD+TVTA+P K
Sbjct: 1 MDYLDIESFRSRYSDITVTAVPSRPK 26
>AY069656-1|AAL39801.1| 236|Drosophila melanogaster LD43057p
protein.
Length = 236
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 262 MEAMDIQAVESKLSDVTVTAIPMS 333
M+ MDIQAVESKLSDVTVT IP S
Sbjct: 1 MDIMDIQAVESKLSDVTVTPIPRS 24
>AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD23876
protein.
Length = 1658
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 373 SHATISTVPASSPSSVGKDKDNGTSKYAQLLSVIEEMGKEVRPSYSGSRSSAERLKR 543
S+ ++TVP SSP++ G N A EE + R S SGS S++ +L R
Sbjct: 2 SNINVNTVPRSSPNANGNPNANPNRSVAS-----EEEEGDGRMSDSGSNSASSQLSR 53
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 232 GXTRQRIKXAMEAMDIQAVESKLSDVTVTAIPMSGKNVHKELGHGGSSHATISTVPASSP 411
G +Q+ + + +Q + K +T+T P KN+ + L GG++ S + + P
Sbjct: 1073 GPQQQQPTQQGQHVKVQPIAGKPKALTITPRPQMPKNIIRLLPAGGATVTGNSVIGGTKP 1132
Query: 412 SSV 420
+SV
Sbjct: 1133 NSV 1135
>AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA
protein.
Length = 1658
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 373 SHATISTVPASSPSSVGKDKDNGTSKYAQLLSVIEEMGKEVRPSYSGSRSSAERLKR 543
S+ ++TVP SSP++ G N A EE + R S SGS S++ +L R
Sbjct: 2 SNINVNTVPRSSPNANGNPNANPNRSVAS-----EEEEGDGRMSDSGSNSASSQLSR 53
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 232 GXTRQRIKXAMEAMDIQAVESKLSDVTVTAIPMSGKNVHKELGHGGSSHATISTVPASSP 411
G +Q+ + + +Q + K +T+T P KN+ + L GG++ S + + P
Sbjct: 1073 GPQQQQPTQQGQHVKVQPIAGKPKALTITPRPQMPKNIIRLLPAGGATVTGNSVIGGTKP 1132
Query: 412 SSV 420
+SV
Sbjct: 1133 NSV 1135
>BT003648-1|AAO39652.1| 938|Drosophila melanogaster AT11044p
protein.
Length = 938
Score = 29.5 bits (63), Expect = 6.5
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 292 SKLSDVTVTAI-PMSGKNVHKELGHGGSSHATISTVPASSPSSVGK-DKDNGTSK 450
S +S VTVTA P S + GSS S +P +P+S D+D+GTS+
Sbjct: 522 SSVSTVTVTAAAPNSASDSTLARSGTGSSSTARSVLPPMTPTSSRYWDRDSGTSR 576
>AE014298-3177|AAN09566.1| 938|Drosophila melanogaster CG14619-PC,
isoform C protein.
Length = 938
Score = 29.5 bits (63), Expect = 6.5
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 292 SKLSDVTVTAI-PMSGKNVHKELGHGGSSHATISTVPASSPSSVGK-DKDNGTSK 450
S +S VTVTA P S + GSS S +P +P+S D+D+GTS+
Sbjct: 522 SSVSTVTVTAAAPNSASDSTLARSGTGSSSTARSVLPPMTPTSSRYWDRDSGTSR 576
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 560 VFWLGSVSLKQKDRHDSSFDSNKSNQSIFSVPQSKLKYTWK*YNFXLYIILPL*MLHKIC 739
+ +LGS + + K+ SS SN SN S + K++W +++++ L + K+C
Sbjct: 253 ISYLGSFAAQLKNSSSSSSSSNSSNNSSTQILNGLNKHSW------IFLLIYLNLSAKVC 306
Query: 740 KL-FNERHL 763
++E+ L
Sbjct: 307 LAGYHEKRL 315
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,988,761
Number of Sequences: 53049
Number of extensions: 676770
Number of successful extensions: 2407
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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