Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_B10
         (879 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125274-1|AAI25275.1|  578|Homo sapiens ANKRD41 protein protein.      33   1.0  
AK092706-1|BAC03953.1|  575|Homo sapiens protein ( Homo sapiens ...    33   1.0  
BC067293-1|AAH67293.1|  580|Homo sapiens F-box protein 24 protein.     32   2.4  
AC069281-1|AAP21863.1|  580|Homo sapiens unknown protein.              32   2.4  
AF174604-1|AAF04525.1|  318|Homo sapiens F-box protein Fbx24 pro...    32   3.2  
AF053356-11|AAC78801.1|  318|Homo sapiens ORF4 protein.                32   3.2  
AC069281-2|AAP21862.1|  318|Homo sapiens unknown protein.              32   3.2  

>BC125274-1|AAI25275.1|  578|Homo sapiens ANKRD41 protein protein.
          Length = 578

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = +1

Query: 490 DNVSEASFVTSVEESCRVDQCTQTPPSGKSRPRT----LQRYHTSDHIYERSAYRKHKHE 657
           D  S+ASFVT+VE S   D  + TPP   S P T    L   H +  +          + 
Sbjct: 203 DYSSDASFVTAVEVSGAEDPASDTPPWAGSLPPTRQGLLHVVHANQRVPRSQGTEAELNA 262

Query: 658 HYQLMTKSPSYDGHPKFKVSVTDSPTISLTP 750
             Q +T +P       F+ S +  P +  +P
Sbjct: 263 RLQALTLTP--PNAAGFQSSPSSMPLLDRSP 291


>AK092706-1|BAC03953.1|  575|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35387 fis, clone SKNMC1000123, weakly similar to
           CYCLIN-DEPENDENT KINASE 4 INHIBITOR A. ).
          Length = 575

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = +1

Query: 490 DNVSEASFVTSVEESCRVDQCTQTPPSGKSRPRT----LQRYHTSDHIYERSAYRKHKHE 657
           D  S+ASFVT+VE S   D  + TPP   S P T    L   H +  +          + 
Sbjct: 200 DYSSDASFVTAVEVSGAEDPASDTPPWAGSLPPTRQGLLHVVHANQRVPRSQGTEAELNA 259

Query: 658 HYQLMTKSPSYDGHPKFKVSVTDSPTISLTP 750
             Q +T +P       F+ S +  P +  +P
Sbjct: 260 RLQALTLTP--PNAAGFQSSPSSMPLLDRSP 288


>BC067293-1|AAH67293.1|  580|Homo sapiens F-box protein 24 protein.
          Length = 580

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 591 LTKVSHF*PHLREICVQETQARALPVNDK 677
           L KVSH+ PHLR  C+   Q+  L V D+
Sbjct: 291 LRKVSHYLPHLRVACMTSNQSSTLYVTDQ 319


>AC069281-1|AAP21863.1|  580|Homo sapiens unknown protein.
          Length = 580

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 591 LTKVSHF*PHLREICVQETQARALPVNDK 677
           L KVSH+ PHLR  C+   Q+  L V D+
Sbjct: 291 LRKVSHYLPHLRVACMTSNQSSTLYVTDQ 319


>AF174604-1|AAF04525.1|  318|Homo sapiens F-box protein Fbx24
           protein.
          Length = 318

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 591 LTKVSHF*PHLREICVQETQARALPVND 674
           L KVSH+ PHLR  C+   Q+  L V D
Sbjct: 277 LRKVSHYLPHLRVACMTSNQSSTLYVTD 304


>AF053356-11|AAC78801.1|  318|Homo sapiens ORF4 protein.
          Length = 318

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 591 LTKVSHF*PHLREICVQETQARALPVND 674
           L KVSH+ PHLR  C+   Q+  L V D
Sbjct: 277 LRKVSHYLPHLRVACMTSNQSSTLYVTD 304


>AC069281-2|AAP21862.1|  318|Homo sapiens unknown protein.
          Length = 318

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 591 LTKVSHF*PHLREICVQETQARALPVND 674
           L KVSH+ PHLR  C+   Q+  L V D
Sbjct: 277 LRKVSHYLPHLRVACMTSNQSSTLYVTD 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,111,188
Number of Sequences: 237096
Number of extensions: 2702936
Number of successful extensions: 7059
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7055
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)