Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_B05
         (928 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           30   2.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.3  
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    29   6.9  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
 Frame = -1

Query: 892 PPXXPFX-GXGPFGAXX*KXFFRGYPPIXGEXXXPPPXGXGXXPPPP 755
           PP  PF  G  P G    +    G PP       PPP      PPPP
Sbjct: 203 PPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPP 249


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 820 PPIXGEXXXPPPXGXGXXPPPP 755
           PP  G    PPP G    PPPP
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPP 369


>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 820 PPIXGEXXXPPPXGXGXXPPPPXXXXG 740
           P + G+   PPP   G  PPPP    G
Sbjct: 41  PQMWGQAPPPPPQMWGQAPPPPQPAYG 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,428,169
Number of Sequences: 37544
Number of extensions: 331924
Number of successful extensions: 1108
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)