Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_A24
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.29
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 0.64
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.67
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.67
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.67
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 0.89
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 0.89
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.6
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 3.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.6
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 3.6
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 3.6
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 3.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 6.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.3
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 6.3
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 28 8.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.3
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 28 8.3
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.17
Identities = 25/96 (26%), Positives = 29/96 (30%)
Frame = +2
Query: 620 PPXSXQKSTLXXTXGETPTGXKDTRGSXXXXXXXXXXXRTXRNRXXGXPXPXXKXGATPT 799
PP S + G PTG D G+ + G P P GA P+
Sbjct: 196 PPGPFNPSEAPPSGG--PTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 253
Query: 800 PXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
P P S PP P PPGP
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 289
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +2
Query: 620 PPXSXQKSTLXXTXGETPTGXKDTRGSXXXXXXXXXXXRTXRNRXXGXPXPXXKXGATPT 799
PP S + G P G D G+ + G P P GA P+
Sbjct: 256 PPGPFNPSGAPPSGG--PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPS 313
Query: 800 PXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
P P S PP P PPGP
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 349
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +2
Query: 620 PPXSXQKSTLXXTXGETPTGXKDTRGSXXXXXXXXXXXRTXRNRXXGXPXPXXKXGATPT 799
PP S + G P G D G+ + G P P GA P+
Sbjct: 286 PPGPFDPSGAPPSGG--PPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 343
Query: 800 PXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
P P S PP P PPGP
Sbjct: 344 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 379
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +2
Query: 620 PPXSXQKSTLXXTXGETPTGXKDTRGSXXXXXXXXXXXRTXRNRXXGXPXPXXKXGATPT 799
PP S + G P G D G+ + G P P GA P+
Sbjct: 346 PPGPFNPSGAPPSGG--PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 403
Query: 800 PXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
P P S PP P PPGP
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 439
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +2
Query: 620 PPXSXQKSTLXXTXGETPTGXKDTRGSXXXXXXXXXXXRTXRNRXXGXPXPXXKXGATPT 799
PP S + G P G D G+ + G P P GA P+
Sbjct: 361 PPGPFDPSGAPPSGG--PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 418
Query: 800 PXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
P P S PP P PPGP
Sbjct: 419 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 454
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +2
Query: 620 PPXSXQKSTLXXTXGETPTGXKDTRGSXXXXXXXXXXXRTXRNRXXGXPXPXXKXGATPT 799
PP S + G P G D G+ + G P P GA P+
Sbjct: 376 PPGPFDPSGAPPSGG--PPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 433
Query: 800 PXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
P P S PP P PPGP
Sbjct: 434 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 469
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 758 GXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P GA P+ P P S PP P PPGP
Sbjct: 435 GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 484
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 758 GXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P GA P+ P P S PP P PPGP
Sbjct: 450 GPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 499
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 758 GXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P GA P+ P P S PP P PPGP
Sbjct: 255 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 758 GXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P GA P+ P P S PP P PPGP
Sbjct: 345 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 394
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 758 GXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P GA P+ P P S PP P PPGP
Sbjct: 465 GPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 514
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPP 342
PP P P P + PP P+R+ M PP PPP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPP--LPARWPDSLMXXXPPXPPPVPG 333
PP P P PP+ P P P PP PPP PG
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 764 PXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
P P TP P P PT P PP PP P PP + PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTP--RPPPPPSSGMWPPPP--PPPPGRTPGPP 311
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PP P S P P PP P P+S PP PPP P
Sbjct: 189 PPPP--SFNINPFQPMFSQPPPPPLPPNSQFMTPPPRPPPAP 228
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPP 342
PP P P P + PP P+R+ M PP PPP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPP--LPARWPDSLMXXXPPXPPPVPG 333
PP P P PP+ P P P PP PPP PG
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 764 PXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
P P TP P P PT P PP PP P PP + PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTP--RPPPPPSSGMWPPPP--PPPPGRTPGPP 321
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PP P + P P+ PP P + S++ PP PPP+P
Sbjct: 1358 PPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL--PPPPPPLP 1397
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPP 345
PP P S P PP PP ++ P + PP PP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 829 PPPPGXPXPXXXXXXXPXSPXXPPRPQXQXXP 924
PPPP P P P P PP P P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAP 1369
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPP 342
PP P P +PP R PP+ P PP P P
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/58 (27%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = +2
Query: 764 PXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXP----XNXPPGPKXKXPP 925
P + G + P P P P PP PP P PP P+ + PP
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = -1
Query: 524 PXXVXXRXPAXGWXDTXXXXRPPAPXXSXXAXPEAPPIRHPPLPARWPD--SLMXXXPPX 351
P + PA D PP P A +PP PP R P S PP
Sbjct: 103 PGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPM 162
Query: 350 PPPVP 336
PP P
Sbjct: 163 TPPSP 167
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect(2) = 0.64
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -1
Query: 461 PPAPXXSXXAXP---EAPPIRHPPLPARWPDSLMXXXPPXPPPV 339
PP P P APP PP+P P S PP PPPV
Sbjct: 503 PPPPPPLLGIAPMSTNAPP--PPPMPGMAPLSTGAPTPPPPPPV 544
Score = 20.6 bits (41), Expect(2) = 0.64
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1
Query: 359 PPXPPPVPGXXXXG 318
PP PPP P G
Sbjct: 578 PPPPPPPPSFMFNG 591
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = +2
Query: 758 GXPXPXXKXGATP-----TPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P G+ P +P P P R S P PP PP PP P
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = +2
Query: 758 GXPXPXXKXGATP-----TPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P G+ P +P P P R S P PP PP PP P
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = +2
Query: 758 GXPXPXXKXGATP-----TPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGP 907
G P P G+ P +P P P R S P PP PP PP P
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +2
Query: 734 RTXRNRXXGXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKX 913
++ R + G P P P P + + P PP R PP P + PP P
Sbjct: 59 QSSRQQQVGRPTESPPLPPPPLPLSNPPAKPTPPPP---PPKPTIRPPPIPASPPPRPPA 115
Query: 914 KXP 922
P
Sbjct: 116 SEP 118
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 425 EAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
E+PP+ PPLP P + PP PPP P
Sbjct: 71 ESPPLPPPPLPLSNPPA--KPTPPPPPPKP 98
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPP 345
PP P + A P PP PP P P + PP PP
Sbjct: 78 PPLPLSNPPAKPTPPP--PPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +2
Query: 734 RTXRNRXXGXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKX 913
++ R + G P P P P + + P PP R PP P + PP P
Sbjct: 281 QSSRQQQVGRPTESPPLPPPPLPLSNPPAKPTPPPP---PPKPTIRPPPIPASPPPRPPA 337
Query: 914 KXP 922
P
Sbjct: 338 SEP 340
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 425 EAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
E+PP+ PPLP P + PP PPP P
Sbjct: 293 ESPPLPPPPLPLSNPPA--KPTPPPPPPKP 320
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPP 345
PP P + A P PP PP P P + PP PP
Sbjct: 300 PPLPLSNPPAKPTPPP--PPPKPTIRPPPIPASPPPRPP 336
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 794 PTPXPXXPTRXSLPXXXXXPPXXXXRXP-PXPXNXPPGPKXKXPP 925
PTP P P LP PP + P P P P P+ + P
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 794 PTPXPXXPTRXSLPXXXXXPPXXXXRXP-PXPXNXPPGPKXKXPP 925
PTP P P LP PP + P P P P P+ + P
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 794 PTPXPXXPTRXSLPXXXXXPPXXXXRXP-PXPXNXPPGPKXKXPP 925
PTP P P LP PP + P P P P P+ + P
Sbjct: 90 PTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQP 134
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = -1
Query: 461 PPAPXXSXXAXP---EAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PP P S P APP PP P P PP PPP P
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = -1
Query: 461 PPAPXXSXXAXP---EAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PP P S P APP PP P P PP PPP P
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Frame = +2
Query: 764 PXPXXKXGATPTPXPXXPT---RXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
P K P+P P P+ S P PP R PP PPGP + PP
Sbjct: 217 PSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPP----GPPGPPTRRPP 269
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 458 PAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
P+P ++PP P P P S+ PP PPP P
Sbjct: 483 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 791 TPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
TP P P P+R P P PP P P PP
Sbjct: 469 TPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 513
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXP-PPV 339
PP P P+APP PP+ P + PP P PPV
Sbjct: 201 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPV 242
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXP-PPV 339
PP P P+APP PP+ P + PP P PPV
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPV 228
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXP-PPV 339
PP P P+APP PP+ P + PP P PPV
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPV 228
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 785 GATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
G P P P P P PP + P P PP P PP
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +2
Query: 758 GXPXPXXKXGATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
G P P G TP P P + PP PP P P G + PP
Sbjct: 208 GPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPP-----GPPGPPGNPGGIGPRGPP 258
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 455 APXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
AP P PP PP PA++ PP PPP+P
Sbjct: 43 APMPMPMPMPVCPP--PPPCPAQFCPPPPICPPPPPPPMP 80
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 794 PTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
P P P P P PP PP P PP P P
Sbjct: 48 PMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PP P P PP PP+P PP PPP+P
Sbjct: 58 PPCPAQFCPPPPICPPPPPPPMPC----------PPPPPPMP 89
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 923 GXXXFWGRGGXXGEXGXXXXXXXGXGXPGGGGXXGW 816
G +G G G+ G G G GGGG GW
Sbjct: 236 GGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 271
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 923 GXXXFWGRGGXXGEXGXXXXXXXGXGXPGGGGXXGW 816
G +G G G+ G G G GGGG GW
Sbjct: 198 GGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 233
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 923 GXXXFWGRGGXXGEXGXXXXXXXGXGXPGGGGXXGW 816
G +G G G+ G G G GGGG GW
Sbjct: 236 GGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 271
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PP P A PP P P +L PP PPP P
Sbjct: 543 PPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPP 584
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVPG 333
PP P APP PP P M PP PPP PG
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPP-------MLGGPPPPPPPPG 597
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 458 PAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
P P + E PPI PP P P PP PPP P
Sbjct: 336 PQPAATPVEITEIPPIISPPAPPPPP------PPPPPPPPP 370
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -1
Query: 458 PAPXXSXXAXPEAPPIRHPPLPARW-P--DSLMXXXPPXP 348
P P + A +AP IR PP PAR+ P SL PP P
Sbjct: 216 PPPPPAPPAQTQAPLIRVPPPPARFIPTLKSLYSIDPPRP 255
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 788 ATPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNX-PPGPKXKXPP 925
A TP P + PP + PP P PP P K PP
Sbjct: 154 APVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPP 200
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 791 TPTPXPXXPTRXSLPXXXXXPPXXXXRXPPXPXNXPPGPKXKXPP 925
TP P P P+R P P PP P P PP
Sbjct: 462 TPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 506
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 820 PXQPPPPGXPXPXXXXXXXPXSPXXPPRPQXQXXP 924
P PPPP P P P P P PQ + P
Sbjct: 97 PPPPPPPTQPEPEPEPRPEP-QPEPQPEPQPEPQP 130
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 908 WGRGGXXGEXGXXXXXXXGXGXPGGGGXXG 819
WG G G G G G GGGG G
Sbjct: 72 WGNNGGGGNWGGNGGGGNGGGGRGGGGGGG 101
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 458 PAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PA P PP+ PP+ A P L P P PVP
Sbjct: 2 PATPVPPVTMPPVPPVGFPPVTA--PPGLHPPPPVPPVPVP 40
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVPG 333
PPAP P P +PP P + PP PP+PG
Sbjct: 166 PPAPAPGVYMPPPGMPGAYPP-----PRMPIGHGPPGGPPMPG 203
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 461 PPAPXXSXXAXPEAPPIRHPPLPARWPDSLMXXXPPXPPPVPG 333
PPAP P P +PP P + PP PP+PG
Sbjct: 166 PPAPAPGVYMPPPGMPGAYPP-----PRMPIGHGPPGGPPMPG 203
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 458 PAPXXSXXAXPE-APPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PAP + P+ A P+ PP PA +P + P P P P
Sbjct: 78 PAPAPPLASYPQNAVPVPAPP-PAPYPQHAVPAPAPPPAPYP 118
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +1
Query: 817 HPXQPPPPGX-PXPXXXXXXXPXSPXXPPRPQXQ 915
+P PPPPG P P P PP P Q
Sbjct: 715 YPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQ 748
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 419 PPIRHPPLPARWPDSLMXXXPPXPPPVP 336
PP HPP+P P + P PPVP
Sbjct: 5 PPQPHPPMPPMPPVTAPPGTMPPMPPVP 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,412,613
Number of Sequences: 27780
Number of extensions: 183522
Number of successful extensions: 1787
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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