Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_A18
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 364 e-100
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 364 e-100
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 364 e-100
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 363 e-100
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 363 e-100
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 363 e-100
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 363 e-100
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 363 e-100
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 359 1e-98
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 162 2e-39
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 42 0.003
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 41 0.005
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 41 0.005
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.021
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 31 5.7
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 10.0
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 364 bits (895), Expect = e-100
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 364 bits (895), Expect = e-100
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 364 bits (895), Expect = e-100
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 363 bits (894), Expect = e-100
Identities = 164/203 (80%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 363 bits (894), Expect = e-100
Identities = 164/203 (80%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 363 bits (894), Expect = e-100
Identities = 164/203 (80%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 363 bits (894), Expect = e-100
Identities = 164/203 (80%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 363 bits (894), Expect = e-100
Identities = 164/203 (80%), Positives = 182/203 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 582
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 583 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 762
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK S
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS 223
Query: 763 TVKRXTSAGRKVGLIAARRTGRI 831
T++R AGRKVGLIAARRTGR+
Sbjct: 224 TIRRDAPAGRKVGLIAARRTGRL 246
Score = 72.1 bits (169), Expect = 2e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 93 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 359 bits (882), Expect = 1e-98
Identities = 162/200 (81%), Positives = 179/200 (89%)
Frame = +1
Query: 232 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 411
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 412 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 591
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 592 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVK 771
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIR 180
Query: 772 RXTSAGRKVGLIAARRTGRI 831
R AGRKVGLIAARRTGR+
Sbjct: 181 RDAPAGRKVGLIAARRTGRL 200
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 162 bits (393), Expect = 2e-39
Identities = 73/91 (80%), Positives = 81/91 (89%)
Frame = +1
Query: 223 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 402
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 40 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 99
Query: 403 VGAMPEGTIVCNLEEKMGDRGRLARASGNFA 495
VG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 100 VGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
Score = 64.1 bits (149), Expect = 7e-10
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 105 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIK 218
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIK
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 38
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 41.9 bits (94), Expect = 0.003
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Frame = +1
Query: 226 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 390
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 391 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 570
+ P+GA+P GT++ N+E + G + RA+G ++ + ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQVL 237
Query: 571 SSNRGMVGIVAGGGRIDKPILKAGR 645
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.005
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +1
Query: 226 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 390
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 391 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 570
+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 237
Query: 571 SSNRGMVGIVAGGGRIDKPILKAGR 645
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.005
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +1
Query: 226 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 390
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 391 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 570
+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 237
Query: 571 SSNRGMVGIVAGGGRIDKPILKAGR 645
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.021
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +1
Query: 304 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 468
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 469 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 645
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 31.1 bits (67), Expect = 5.7
Identities = 27/97 (27%), Positives = 35/97 (36%), Gaps = 4/97 (4%)
Frame = +3
Query: 117 RKGAGSVFVSHT--KKRKGAPKLRSLD--YAERHGYIKVSC*GYNP*PW*RCTFGCCTLP 284
R A SV S + LRS+ + RH SC +P P RC C LP
Sbjct: 227 RSAASSVVASPSVGASASATASLRSMGRVWWPRHTPASSSC---SPRPMARCISRRCQLP 283
Query: 285 RSIQVQDKEGALHCSRRALHRPICLLWKESNS*SWKC 395
+Q + C P+CL + SW C
Sbjct: 284 HIASLQARSSPCTCDHLIPCLPLCLRLHGPGAPSWAC 320
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 674 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 579
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,510,139
Number of Sequences: 237096
Number of extensions: 3166275
Number of successful extensions: 6809
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6807
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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