Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_A17
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   2.9  
12_02_1174 - 26696869-26698191                                         29   5.0  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   5.0  
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544...    29   5.0  
01_05_0490 + 22672241-22674679                                         29   5.0  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/47 (29%), Positives = 14/47 (29%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPPXXXKN 597
           PPPPPP                          P PP  PPPP    N
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPN 614



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPP 612
           PPPPPP                          P PP  PPPP
Sbjct: 602 PPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPP 612
           PPPPPP                          P PP  PPPP
Sbjct: 123 PPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPP 164



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPP 612
           PPPPPP                          P PP  PPPP
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPP 165


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPP 612
           PPPPPP                          P PP  PPPP
Sbjct: 289 PPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPP 330



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPP 612
           PPPPPP                          P PP  PPPP
Sbjct: 290 PPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPP 331


>04_04_0137 -
           23053148-23053798,23053911-23054146,23054268-23054458,
           23054587-23056010
          Length = 833

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPP 612
           PPPPPP                          P PP  PPPP
Sbjct: 365 PPPPPPPPPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPPPP 406


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 737 PPPPPPXXXXXXXXXXXXXXXXXXXXXXGXXXPXPPXXPPPP 612
           PPPPPP                          P PP  PPPP
Sbjct: 665 PPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPLPPPPPPPPPP 706


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,168,589
Number of Sequences: 37544
Number of extensions: 436694
Number of successful extensions: 3797
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3468
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)