Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_A15
(921 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.70
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.70
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.93
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 8.6
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +2
Query: 491 PPRGXGXXFLGAXFXPPXPPXA--RPXXXGXXXGPPPXPGGXXXPPPXPGXAP 643
PP +GA PP PP A P PP P PPP P AP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 33.5 bits (73), Expect = 0.043
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +1
Query: 496 PGXGXGXFGGXLPXPPTPXRAPXXGXXGXRSPPPPGGXXXPPPXXRGXPXXXLXP 660
P G G LP PP P R+ G PP G PPP R P P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPL---PPQGRSAPPPPPPRSAPSTGRQP 376
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +1
Query: 466 GSXXXKXPPPPGXGXGXFGGXLPXPPTPXRAPXXGXXGXRSPPPPGGXXXPPP 624
GS PPPP G +P PP AP RS P G PPP
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP--PPPPRSAPSTG--RQPPP 378
Score = 29.1 bits (62), Expect = 0.93
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXXXXPPPPP 894
PPPP P PP PPPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +2
Query: 536 PPXPPXARPXXXGXXXGPPPXPGGXXXPPPXPG---XAPXXXSXXXAPPXXXNPTNA 697
P PP A P PP P PP P AP APP P A
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPA 485
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 582 PVPPPXRGGXXSPPXXPGXP 641
P+PPP G SPP P P
Sbjct: 255 PIPPPSNGTVSSPPNSPPRP 274
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 7/41 (17%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPP-------PXXXXPPPPPXXQXXGGLP 921
PPPP P PP PPPPP G +P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 826 PPHPXXXXXAPP-PPXXXXPPPPP 894
PP P APP PP PPP P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAP 480
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 814 GXPPPPHPXXXXXAPPPPXXXXPPPPPXXQXXGG 915
G PPPP P A PPP PPPPP GG
Sbjct: 760 GPPPPPPPPGVAGAGPPP----PPPPPPAVSAGG 789
Score = 31.1 bits (67), Expect = 0.23
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Frame = +2
Query: 479 KKXPPPRGXGXXFLGAXFXPPXPPXARPXXXGXXXGPPPXPG----GXXXPPPXPGXAPX 646
K PPP A P PP A G PPP PG G PPP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPA--PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Query: 647 XXSXXXAPPXXXNP 688
S AP P
Sbjct: 788 GGSRYYAPAPQAEP 801
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 823 PPPHPXXXXXAPPPPXXXXPPPPPXXQXXGG 915
P P P PP P PPPPP G
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXXXXPPPPP 894
PPPP P P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 487 PPPPGXGXGXFGGXLPXPPTPXRAPXXGXXGXRSPPP 597
PPPP G G P PP P A G +P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = -2
Query: 548 GVGGXGRXPPKXPXP-XPGGGGXFXXXXPXXXPPP 447
GV G G PP P P GG + P P P
Sbjct: 769 GVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXX--XXPPPPP 894
PP P PPPP PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXXXXP----PPPPXXQXXG 912
PPP H PPPP P PPPP G
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPG 243
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXXXXP----PPPPXXQXXG 912
PPP H PPPP P PPPP G
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXXXXP----PPPPXXQXXG 912
PPP H PPPP P PPPP G
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXXXXP----PPPPXXQXXG 912
PPP H PPPP P PPPP G
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = +1
Query: 820 PPPPHPXXXXXAPPPPXXXXP----PPPP 894
PPP H PPPP P PPPP
Sbjct: 313 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.70
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 814 GXPPPPHPXXXXXAPPPPXXXXPPPPP 894
G PPPP P P P PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPP---PPPPP 30
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 599 PGGXXXPPPXPGXAPXXXSXXXAPP 673
PG PPP PG P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +2
Query: 539 PXPPXARPXXXGXXXGPP-PXPGGXXXPPPXPGXAPXXXSXXXAPPXXXNPTNA 697
P P A P PP P P P P P AP A P P+ A
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA 1158
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +2
Query: 539 PXPPXARPXXXGXXXGPP-PXPGGXXXPPPXPGXAPXXXSXXXAPPXXXNPTN 694
P P A P PP P P P P P AP A P P++
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 814 GXPPPPHPXXXXXAPPPPXXXXPPPPP 894
G PP P P P P P PPP
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Frame = +2
Query: 536 PPXPPXAR-PXXXGXXXGPPPXPGGXXXPP---PXPGXAPXXXSXXXAPP 673
PP PP + P G PP P PP P G P APP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = +2
Query: 539 PXPPXARPXXXGXXXG--PPPXPGGXXXPPPXPGXAPXXXSXXXAPPXXXNPTNA 697
P P A P G P P P P P P AP P P+ A
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 814 GXPPPPHPXXXXXAPPPPXXXXPPPPP 894
G PP P P PPP P P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +2
Query: 539 PXPPXARPXXXGXXXGPP-PXPGGXXXPPPXPGXAPXXXSXXXAPPXXXNPTNA 697
P P P PP P P P P P AP A P P+ A
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA 1139
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -1
Query: 642 GASPGXGGG-XXXPPGXGG-GPXXXPXXXGRAXGGXGGXKXAPKXXXPXPRGGG 487
G G GGG PPG GG G G GG GG P P G G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 445 GGGGXXXGSXXXKXPPPPGXGXGXFGG 525
GGG G PP PG G G FGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPG-GFGGFGG 212
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 835 PXXXXXAPPPPXXXXPPPPPXXQXXGGLP 921
P PPPP PPPP G P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +2
Query: 539 PXPPXARPXXXGXXXG-PPPXPGGXXXPPPXPG 634
P PP A P G PPP P P PG
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 536 PPXPPXARPXXXGXXXGPPPXPGGXXXPPPXPGXAPXXXSXXXAPP 673
PP P A P P P PPP P AP S APP
Sbjct: 124 PPSAP-APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS--KAPP 166
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 856 PPPPXXXXPPPPPXXQXXGG 915
PPPP PPPPP GG
Sbjct: 945 PPPP----PPPPPLVSAAGG 960
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.154 0.546
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,827,690
Number of Sequences: 5004
Number of extensions: 27652
Number of successful extensions: 254
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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