Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_A12
         (932 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65923-1|CAA46716.1|  133|Homo sapiens fau protein.                    40   0.010
X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.                  40   0.010
CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.                  40   0.010
BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    40   0.010
AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    40   0.010
AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens ...    40   0.010

>X65923-1|CAA46716.1|  133|Homo sapiens fau protein.
          Length = 133

 Score = 40.3 bits (90), Expect = 0.010
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 96  RAIXLTSMDVNGQESIGQIKERIRTLAGXGDXXLTLXLCGAPXSMIHVXXXXXXXXXXDL 275
           RA  L + +V GQE++ QIK  + +L G       + L GAP                 L
Sbjct: 6   RAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTL 65

Query: 276 TVP--XXGGKVHGSXFRA 323
            V     GGKVHGS  RA
Sbjct: 66  EVAGRMLGGKVHGSLARA 83



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 326 YVNVVQTFGRRRGPNSNS 379
           +VNVV TFG+++GPN+NS
Sbjct: 116 FVNVVPTFGKKKGPNANS 133


>X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.
          Length = 133

 Score = 40.3 bits (90), Expect = 0.010
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 96  RAIXLTSMDVNGQESIGQIKERIRTLAGXGDXXLTLXLCGAPXSMIHVXXXXXXXXXXDL 275
           RA  L + +V GQE++ QIK  + +L G       + L GAP                 L
Sbjct: 6   RAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTL 65

Query: 276 TVP--XXGGKVHGSXFRA 323
            V     GGKVHGS  RA
Sbjct: 66  EVAGRMLGGKVHGSLARA 83



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 326 YVNVVQTFGRRRGPNSNS 379
           +VNVV TFG+++GPN+NS
Sbjct: 116 FVNVVPTFGKKKGPNANS 133


>CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.
          Length = 133

 Score = 40.3 bits (90), Expect = 0.010
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 96  RAIXLTSMDVNGQESIGQIKERIRTLAGXGDXXLTLXLCGAPXSMIHVXXXXXXXXXXDL 275
           RA  L + +V GQE++ QIK  + +L G       + L GAP                 L
Sbjct: 6   RAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTL 65

Query: 276 TVP--XXGGKVHGSXFRA 323
            V     GGKVHGS  RA
Sbjct: 66  EVAGRMLGGKVHGSLARA 83



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 326 YVNVVQTFGRRRGPNSNS 379
           +VNVV TFG+++GPN+NS
Sbjct: 116 FVNVVPTFGKKKGPNANS 133


>BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           protein.
          Length = 133

 Score = 40.3 bits (90), Expect = 0.010
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 96  RAIXLTSMDVNGQESIGQIKERIRTLAGXGDXXLTLXLCGAPXSMIHVXXXXXXXXXXDL 275
           RA  L + +V GQE++ QIK  + +L G       + L GAP                 L
Sbjct: 6   RAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTL 65

Query: 276 TVP--XXGGKVHGSXFRA 323
            V     GGKVHGS  RA
Sbjct: 66  EVAGRMLGGKVHGSLARA 83



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 326 YVNVVQTFGRRRGPNSNS 379
           +VNVV TFG+++GPN+NS
Sbjct: 116 FVNVVPTFGKKKGPNANS 133


>AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fo protein.
          Length = 133

 Score = 40.3 bits (90), Expect = 0.010
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 96  RAIXLTSMDVNGQESIGQIKERIRTLAGXGDXXLTLXLCGAPXSMIHVXXXXXXXXXXDL 275
           RA  L + +V GQE++ QIK  + +L G       + L GAP                 L
Sbjct: 6   RAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTL 65

Query: 276 TVP--XXGGKVHGSXFRA 323
            V     GGKVHGS  RA
Sbjct: 66  EVAGRMLGGKVHGSLARA 83



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 326 YVNVVQTFGRRRGPNSNS 379
           +VNVV TFG+++GPN+NS
Sbjct: 116 FVNVVPTFGKKKGPNANS 133


>AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22986 fis, clone KAT11742. ).
          Length = 133

 Score = 40.3 bits (90), Expect = 0.010
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 96  RAIXLTSMDVNGQESIGQIKERIRTLAGXGDXXLTLXLCGAPXSMIHVXXXXXXXXXXDL 275
           RA  L + +V GQE++ QIK  + +L G       + L GAP                 L
Sbjct: 6   RAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTL 65

Query: 276 TVP--XXGGKVHGSXFRA 323
            V     GGKVHGS  RA
Sbjct: 66  EVAGRMLGGKVHGSLARA 83



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 326 YVNVVQTFGRRRGPNSNS 379
           +VNVV TFG+++GPN+NS
Sbjct: 116 FVNVVPTFGKKKGPNANS 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,090,384
Number of Sequences: 237096
Number of extensions: 1211503
Number of successful extensions: 1495
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)