Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_A07
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0620 + 9916684-9917336,9919219-9919492,9920502-9920585,992...    30   2.2  
10_08_0223 - 15986763-15987575                                         29   6.8  

>03_02_0620 +
           9916684-9917336,9919219-9919492,9920502-9920585,
           9921295-9921356,9921699-9921762
          Length = 378

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 19/72 (26%), Positives = 28/72 (38%)
 Frame = -2

Query: 788 GSXREKGGTGIRXTAGSGKXESARGXFQGETPXIFIVLSGFATSDLSVDFCDARQGGGAY 609
           GS  + GG G R   GSG     +         +    +GFA S +S D+  A    G  
Sbjct: 2   GSSTDHGGAGGRGKKGSGSQLWKKALLHSSLCFVMGFFTGFAPSSVS-DWTSAAVSAGGV 60

Query: 608 GKTPATRPFYGS 573
           G +   R  + +
Sbjct: 61  GSSHVVRSLHAT 72


>10_08_0223 - 15986763-15987575
          Length = 270

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
 Frame = -2

Query: 794 GQGSXREKGGTGIRXTAGSGKXESARGXFQGETPXIFIVLSGFATSDLSVDFCDARQGGG 615
           G G     GG+G    AG G+     G      P      S  +  D +  + DA  GGG
Sbjct: 142 GGGGGGSNGGSGYGAGAGVGQGAGESGSSIAMAP------SPSSGGDYNGGYADAAGGGG 195

Query: 614 A----YGKTPATRPFYGSWPFAG 558
                +G  PA  P YG    AG
Sbjct: 196 GGGGGHGGGPAASPSYGVGAGAG 218


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,286,695
Number of Sequences: 37544
Number of extensions: 296425
Number of successful extensions: 707
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)