Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_A02
         (921 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.0  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +2

Query: 212 PISTKESEVLDQFEXMAEITDSTGETLXLIDTNNENSQNITTEISDQNINMLQNND 379
           P S   S V+D    +   T      +   DTN E + N    +++ N  M+  ND
Sbjct: 295 PNSQGPSSVIDTNTGVDYFTQINRNGIACWDTNTELNPNTFILVAENNTTMVFCND 350


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 18/92 (19%), Positives = 38/92 (41%)
 Frame = +2

Query: 317 NSQNITTEISDQNINMLQNNDSAAEEMKIFDSDTETGLNKITEMPVQKEDTSEIKCTSXQ 496
           NS+  ++ +SD   +  Q+ DS +  ++   +   +  +         E++ E K T+  
Sbjct: 713 NSEMFSSLLSDTEQHFRQHRDSLSPRVENRSAIVHSEASANANSSTSSEESREEKATTSL 772

Query: 497 ELEQFYSNSDAHVKENTEILNITXNKIIENGQ 592
           E E+       H ++  E    + +  I N Q
Sbjct: 773 EAEK--REKSEHCEKGKEYYAASFHTDIGNSQ 802


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,698
Number of Sequences: 438
Number of extensions: 2899
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)