Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P23
         (903 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...   190   6e-48
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.       190   6e-48
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...   190   6e-48
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...   190   6e-48
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...   190   6e-48
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.       190   6e-48
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...   190   6e-48
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...   190   6e-48
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...   190   6e-48
AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11 p...    89   2e-17

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  190 bits (463), Expect = 6e-48
 Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
 Frame = +3

Query: 75  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 236
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 237 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145


>AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11
           protein.
          Length = 83

 Score = 89.4 bits (212), Expect = 2e-17
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +3

Query: 282 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 410
           VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 1   VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 43



 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 415 VEIGDIVTIGECRPLSKTVRFNVLKV 492
           V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 45  VQIGDIVTVGECRPLSKTVRFNVLKV 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,481,301
Number of Sequences: 237096
Number of extensions: 1662188
Number of successful extensions: 6778
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6769
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)