Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P21
         (891 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q30YJ7 Cluster: Putative uncharacterized protein; n=1; ...    35   3.2  
UniRef50_A1EBU3 Cluster: Putative uncharacterized protein; n=1; ...    34   5.6  
UniRef50_Q5ZCW0 Cluster: Putative uncharacterized protein B1045D...    33   9.8  

>UniRef50_Q30YJ7 Cluster: Putative uncharacterized protein; n=1;
           Desulfovibrio desulfuricans G20|Rep: Putative
           uncharacterized protein - Desulfovibrio desulfuricans
           (strain G20)
          Length = 409

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 192 RRACQLRRRSWGRMCKRHRTPPCLPPHVALQEAQGGGMAVPS 67
           R AC  RR S+G   + H T PC+  +     + GG   VPS
Sbjct: 9   RAACSPRRASFGAQGRGHGTAPCIRRYSGASASGGGAFDVPS 50


>UniRef50_A1EBU3 Cluster: Putative uncharacterized protein; n=1;
           Lysobacter enzymogenes|Rep: Putative uncharacterized
           protein - Lysobacter enzymogenes
          Length = 199

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 210 GSMACPRRACQLRRRSWGRMCKRHRTPPCLP 118
           G   C R  C  +RR W R C+R  +  C+P
Sbjct: 163 GPACCCRATCTTKRRRWSRTCRRTWSSGCIP 193


>UniRef50_Q5ZCW0 Cluster: Putative uncharacterized protein
           B1045D11.32; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           B1045D11.32 - Oryza sativa subsp. japonica (Rice)
          Length = 203

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
 Frame = -1

Query: 201 ACPRRACQLRRRSWGRMCKRHRTPPCLPPH--VALQEAQGGGMAVPSWEMREXQSXXGR 31
           A  RR   LRR   G      RTPP LPPH   A Q     G   PSW  R       R
Sbjct: 110 ALRRRPALLRRIELGSP----RTPPWLPPHWAAAAQRPWPRGSTTPSWRCRRRMEAGAR 164


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,223,970
Number of Sequences: 1657284
Number of extensions: 5157848
Number of successful extensions: 14323
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14314
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)