Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P20
         (947 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...    84   2e-16
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...    84   2e-16
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...    81   2e-15

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 50/121 (41%), Positives = 65/121 (53%)
 Frame = +2

Query: 179 KHVGLGFKTPXEAXEGTYIDKXCPFTGNVSIRGRILTGVVQKXEDAEKLS*SAAITFTTY 358
           + VGLGFKTP EA +GTYIDK CP+TG+V IRGRILTGVV+K +    +           
Sbjct: 35  RDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVR 94

Query: 359 PNTIGSRXRHRNMSVHLSPCFRGRGXW*YCNDRRMQTFVQNS*IQCFESFKGQGLEEVFQ 538
             +   + RHRNMSVH SP FR             +   +       +  KGQG ++ F+
Sbjct: 95  KYSRFEK-RHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFK 153

Query: 539 K 541
           K
Sbjct: 154 K 154


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 50/121 (41%), Positives = 65/121 (53%)
 Frame = +2

Query: 179 KHVGLGFKTPXEAXEGTYIDKXCPFTGNVSIRGRILTGVVQKXEDAEKLS*SAAITFTTY 358
           + VGLGFKTP EA +GTYIDK CP+TG+V IRGRILTGVV+K +    +           
Sbjct: 35  RDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVR 94

Query: 359 PNTIGSRXRHRNMSVHLSPCFRGRGXW*YCNDRRMQTFVQNS*IQCFESFKGQGLEEVFQ 538
             +   + RHRNMSVH SP FR             +   +       +  KGQG ++ F+
Sbjct: 95  KYSRFEK-RHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFK 153

Query: 539 K 541
           K
Sbjct: 154 K 154


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score = 81.0 bits (191), Expect = 2e-15
 Identities = 47/121 (38%), Positives = 64/121 (52%)
 Frame = +2

Query: 179 KHVGLGFKTPXEAXEGTYIDKXCPFTGNVSIRGRILTGVVQKXEDAEKLS*SAAITFTTY 358
           + +GLGF+ P EA +GTYIDK CP+TG+V IRGRILTGVV+K +    +           
Sbjct: 34  RQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVR 93

Query: 359 PNTIGSRXRHRNMSVHLSPCFRGRGXW*YCNDRRMQTFVQNS*IQCFESFKGQGLEEVFQ 538
             +   + RHRNMSVH SP FR             +   +       +  KGQG ++ F+
Sbjct: 94  KYSRFEK-RHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFK 152

Query: 539 K 541
           K
Sbjct: 153 K 153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,414,727
Number of Sequences: 53049
Number of extensions: 409490
Number of successful extensions: 701
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4710216690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)