Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P19
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.80 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.80 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    24   1.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 315 LHEKAKCEEVFNACNDPLIKKQL-CYLLARQYIPL 416
           +H   KC+E     +    KK+L CYLLAR Y+ L
Sbjct: 111 IHFDTKCQENSTVIDYKRHKKRLLCYLLAR-YVAL 144


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 315 LHEKAKCEEVFNACNDPLIKKQL-CYLLARQYIPL 416
           +H   KC+E     +    KK+L CYLLAR Y+ L
Sbjct: 129 IHFDTKCQENSTVIDYKRHKKRLLCYLLAR-YVAL 162


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/45 (26%), Positives = 18/45 (40%)
 Frame = -3

Query: 682 SVVTSLSRPNPAFTKAFTNVADRFCLAESTGCSVSKDGRRADPAD 548
           +   +L RP+P  +  F + A R    E+           ADP D
Sbjct: 102 AAAANLLRPHPYLSPLFHSAAPRTASRETKSSESDSGASSADPDD 146


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 540 WLESAGSALRPSLLTEH 590
           WL++    LRP LL +H
Sbjct: 102 WLQNVEPNLRPKLLLKH 118


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 713 GSWYALSGRVPWYDSLXG 766
           G WY   G  PW  S+ G
Sbjct: 461 GHWYLDCGFGPWKPSMHG 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,462
Number of Sequences: 336
Number of extensions: 3746
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)