Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_P19
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome, ma... 241 3e-63
BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome, ma... 241 3e-63
BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome, ma... 241 3e-63
BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome, ma... 241 3e-63
X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein. 240 6e-63
AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPa... 239 1e-62
D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subu... 238 2e-62
U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor typ... 229 1e-59
U18247-1|AAA57339.1| 591|Homo sapiens p67 protein. 62 3e-09
Z99757-1|CAB75612.1| 520|Homo sapiens c394H11.1 (similar to SOX... 32 3.2
BC031797-1|AAH31797.1| 446|Homo sapiens SRY (sex determining re... 32 3.2
AK024491-1|BAB15781.1| 376|Homo sapiens FLJ00094 protein protein. 32 3.2
AF226675-1|AAF35886.1| 446|Homo sapiens transcription factor SO... 32 3.2
AF164104-1|AAF37424.1| 328|Homo sapiens transcription factor SO... 32 3.2
AE006465-6|AAK61260.1| 446|Homo sapiens SRY (sex determining re... 32 3.2
BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain con... 30 9.9
AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein pr... 30 9.9
AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens ... 30 9.9
>BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 241 bits (589), Expect = 3e-63
Identities = 114/239 (47%), Positives = 169/239 (70%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ Y +VCLYL C +YV EPE++
Sbjct: 188 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSA 247
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L+ L + +F +P A+ +A+ L++ E++F +C D +++KQ+ ++L R + LE+
Sbjct: 248 LLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 308 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 363
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 364 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLGMILLW 420
>BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 241 bits (589), Expect = 3e-63
Identities = 114/239 (47%), Positives = 169/239 (70%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ Y +VCLYL C +YV EPE++
Sbjct: 188 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSA 247
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L+ L + +F +P A+ +A+ L++ E++F +C D +++KQ+ ++L R + LE+
Sbjct: 248 LLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 308 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 363
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 364 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLGMILLW 420
>BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 241 bits (589), Expect = 3e-63
Identities = 114/239 (47%), Positives = 169/239 (70%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ Y +VCLYL C +YV EPE++
Sbjct: 188 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSA 247
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L+ L + +F +P A+ +A+ L++ E++F +C D +++KQ+ ++L R + LE+
Sbjct: 248 LLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 308 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 363
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 364 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLGMILLW 420
>BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 241 bits (589), Expect = 3e-63
Identities = 114/239 (47%), Positives = 169/239 (70%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ Y +VCLYL C +YV EPE++
Sbjct: 188 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSA 247
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L+ L + +F +P A+ +A+ L++ E++F +C D +++KQ+ ++L R + LE+
Sbjct: 248 LLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 308 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 363
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 364 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLGMILLW 420
>X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein.
Length = 900
Score = 240 bits (587), Expect = 6e-63
Identities = 114/239 (47%), Positives = 169/239 (70%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ Y +VCLYL C +YV EPE++
Sbjct: 179 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSA 238
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L+ L + +F +P A+ +A+ L++ E++F +C D +++KQ+ ++L R + LE+
Sbjct: 239 LLRCALGVFRKFTRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 298
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 299 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 354
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 355 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLGMILLW 411
>AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPase
subunit 2 variant protein.
Length = 913
Score = 239 bits (585), Expect = 1e-62
Identities = 114/239 (47%), Positives = 168/239 (70%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ Y +VCLYL C +YV EPE++
Sbjct: 193 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSA 252
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L L + +F +P A+ +A+ L++ E++F +C D +++KQ+ ++L R + LE+
Sbjct: 253 LLCCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 312
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 313 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 368
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 369 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLGMILLW 425
>D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subunit
p97 protein.
Length = 908
Score = 238 bits (583), Expect = 2e-62
Identities = 113/239 (47%), Positives = 168/239 (70%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ Y +VCLYL C +YV EPE++
Sbjct: 188 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSA 247
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L+ L + +F +P A+ +A+ L++ E++F +C D +++KQ+ ++L R + LE+
Sbjct: 248 LLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 308 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 363
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASL MI W
Sbjct: 364 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLAMILLW 420
>U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor type 1
receptor associated protein protein.
Length = 853
Score = 229 bits (559), Expect = 1e-59
Identities = 112/239 (46%), Positives = 167/239 (69%), Gaps = 5/239 (2%)
Frame = +3
Query: 63 VRXVITFDMKHSAEIQACDLLMEIDRLDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQ 242
V+ ++ ++M H+AE +ACDLLMEI+++D+L + +D++ +VCLYL C +YV EPE++
Sbjct: 131 VKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENASAKVCLYLTSCVNYVPEPENSA 190
Query: 243 ILQGVLDTYLRFGEYPRAMLVAMQLHEKAKCEEVFNACNDPLIKKQLCYLLARQYIPLEV 422
+L+ L + +F +P A+ +A+ L++ E+ ++C D +++KQ+ ++L R + LE+
Sbjct: 191 LLRCALGVFRKFSRFPEALRLALMLNDMELVED-SSSCKDVVVQKQMAFMLGRHGVFLEL 249
Query: 423 DD-----EDLRTILLNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTE 587
+ EDL I+ N +N +FL+LARELDIMEPK P+++YKT LE+ S
Sbjct: 250 SEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---- 305
Query: 588 HPVDSARQNLSATFVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
VDSAR NL+++FVN FVNA FG+DKL+ TDDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 306 -QVDSARMNLASSFVNGFVNAAFGQDKLL-TDDGNKWLYKNKDHGMLSAAASLGMILLW 362
>U18247-1|AAA57339.1| 591|Homo sapiens p67 protein.
Length = 591
Score = 61.7 bits (143), Expect = 3e-09
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = +3
Query: 627 FVNAFVNAGFGRDKLVTTDDGNKWMYXXKDHGMLSAAASLGMIHXW 764
F F +DKL+T DDGNKW+Y KDHGMLSAAASLGMI W
Sbjct: 61 FCEWLCECSFWQDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLW 105
>Z99757-1|CAB75612.1| 520|Homo sapiens c394H11.1 (similar to SOX
(SRY (sex determining region Y))) protein.
Length = 520
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 510 PKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATFVN 635
P TP KT L+ AG+ L PVDS RQN+ + V+
Sbjct: 298 PPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVD 339
>BC031797-1|AAH31797.1| 446|Homo sapiens SRY (sex determining
region Y)-box 8 protein.
Length = 446
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 510 PKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATFVN 635
P TP KT L+ AG+ L PVDS RQN+ + V+
Sbjct: 224 PPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVD 265
>AK024491-1|BAB15781.1| 376|Homo sapiens FLJ00094 protein protein.
Length = 376
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 510 PKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATFVN 635
P TP KT L+ AG+ L PVDS RQN+ + V+
Sbjct: 154 PPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVD 195
>AF226675-1|AAF35886.1| 446|Homo sapiens transcription factor SOX8
protein.
Length = 446
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 510 PKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATFVN 635
P TP KT L+ AG+ L PVDS RQN+ + V+
Sbjct: 224 PPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVD 265
>AF164104-1|AAF37424.1| 328|Homo sapiens transcription factor SOX8
protein.
Length = 328
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 510 PKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATFVN 635
P TP KT L+ AG+ L PVDS RQN+ + V+
Sbjct: 106 PPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVD 147
>AE006465-6|AAK61260.1| 446|Homo sapiens SRY (sex determining
region Y)-box 8 protein.
Length = 446
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 510 PKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATFVN 635
P TP KT L+ AG+ L PVDS RQN+ + V+
Sbjct: 224 PPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVD 265
>BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain
containing 2 protein.
Length = 518
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 450 LNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATF 629
L D FL +A E++ P E+ + W E + + L H V+S++ N
Sbjct: 397 LTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRCHTVESSKPNTLTLK 456
Query: 630 VNAF 641
NAF
Sbjct: 457 DNAF 460
>AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein
protein.
Length = 243
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 450 LNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATF 629
L D FL +A E++ P E+ + W E + + L H V+S++ N
Sbjct: 122 LTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRCHTVESSKPNTLTLK 181
Query: 630 VNAF 641
NAF
Sbjct: 182 DNAF 185
>AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ35756 fis, clone TESTI2004687. ).
Length = 455
Score = 30.3 bits (65), Expect = 9.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 450 LNAHINDHFLSLARELDIMEPKTPEEVYKTWLESAGSALRPSLLTEHPVDSARQNLSATF 629
L D FL +A E++ P E+ + W E + + L H V+S++ N
Sbjct: 334 LTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRCHTVESSKPNTLTLK 393
Query: 630 VNAF 641
NAF
Sbjct: 394 DNAF 397
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,991,672
Number of Sequences: 237096
Number of extensions: 2278824
Number of successful extensions: 5317
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5292
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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