Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_P17
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 326 2e-89
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 326 2e-89
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 326 2e-89
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 324 7e-89
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 296 2e-80
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 296 2e-80
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 296 2e-80
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 296 2e-80
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 295 3e-80
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 295 4e-80
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 290 1e-78
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 290 1e-78
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 274 4e-74
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 271 4e-73
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 255 4e-68
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 227 6e-60
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 147 1e-35
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 146 2e-35
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 144 6e-35
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 143 2e-34
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 143 2e-34
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 142 3e-34
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 126 2e-29
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 126 2e-29
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 83 3e-16
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 83 3e-16
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.62
AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical... 29 3.3
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.4
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.4
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.4
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 326 bits (800), Expect = 2e-89
Identities = 159/245 (64%), Positives = 177/245 (72%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITX 863
+ + + NLNRLIGQIVSSIT
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 864 SLRXD 878
SLR D
Sbjct: 241 SLRFD 245
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDC+FMVDNEAIYDICRRNLDIER
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 221
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 326 bits (800), Expect = 2e-89
Identities = 159/245 (64%), Positives = 177/245 (72%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITX 863
+ + + NLNRLIGQIVSSIT
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 864 SLRXD 878
SLR D
Sbjct: 241 SLRFD 245
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDC+FMVDNEAIYDICRRNLDIER
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 221
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 326 bits (800), Expect = 2e-89
Identities = 159/245 (64%), Positives = 177/245 (72%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITX 863
+ + + NLNRLIGQIVSSIT
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 864 SLRXD 878
SLR D
Sbjct: 241 SLRFD 245
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDC+FMVDNEAIYDICRRNLDIER
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 221
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 324 bits (795), Expect = 7e-89
Identities = 158/244 (64%), Positives = 176/244 (72%), Gaps = 1/244 (0%)
Frame = +3
Query: 150 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 329
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 330 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 509
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 510 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXXX 689
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPA
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 690 XXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITXS 866
+ + + NLNRLIGQIVSSIT S
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITAS 240
Query: 867 LRXD 878
LR D
Sbjct: 241 LRFD 244
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDC+FMVDNEAIYDICRRNLDIER
Sbjct: 172 PAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 220
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 296 bits (726), Expect = 2e-80
Identities = 146/245 (59%), Positives = 169/245 (68%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSM-TSAAVISTLSAXLHNLNRLIGQIVSSITX 863
+ + NLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 864 SLRXD 878
SLR D
Sbjct: 239 SLRFD 243
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDCAFMVDNEAIYDICRRNLD+ER
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVER 219
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 296 bits (726), Expect = 2e-80
Identities = 146/245 (59%), Positives = 170/245 (69%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSM-TSAAVISTLSAXLHNLNRLIGQIVSSITX 863
+ +S NLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 864 SLRXD 878
SLR D
Sbjct: 239 SLRFD 243
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDCAFMVDNEAIYDICRRNL ++R
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDR 219
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 296 bits (726), Expect = 2e-80
Identities = 146/245 (59%), Positives = 170/245 (69%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSM-TSAAVISTLSAXLHNLNRLIGQIVSSITX 863
+ +S NLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 864 SLRXD 878
SLR D
Sbjct: 239 SLRFD 243
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDCAFMVDNEAIYDICRRNL ++R
Sbjct: 171 PAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDR 219
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 296 bits (726), Expect = 2e-80
Identities = 146/245 (59%), Positives = 169/245 (68%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSM-TSAAVISTLSAXLHNLNRLIGQIVSSITX 863
+ + NLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 864 SLRXD 878
SLR D
Sbjct: 239 SLRFD 243
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDCAFMVDNEAIYDICRRNLD+ER
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVER 219
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 295 bits (724), Expect = 3e-80
Identities = 143/246 (58%), Positives = 168/246 (68%), Gaps = 1/246 (0%)
Frame = +3
Query: 144 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 323
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 324 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 503
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 504 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXX 683
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPA
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 684 XXXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSIT 860
+ L+ + NLNRLI Q++SS+T
Sbjct: 185 SMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVT 244
Query: 861 XSLRXD 878
SLR D
Sbjct: 245 ASLRFD 250
Score = 87.8 bits (208), Expect = 9e-18
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPT 817
P T++VEPYNSI TTHTTLEHSDC+FMVDNEAIYDICRRNLD+ R PT
Sbjct: 178 PAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLAR-PT 228
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 295 bits (723), Expect = 4e-80
Identities = 142/245 (57%), Positives = 169/245 (68%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPA
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAV-ISTLSAXLHNLNRLIGQIVSSITX 863
+ V + S +LNRL+ Q+VSSIT
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITA 240
Query: 864 SLRXD 878
SLR D
Sbjct: 241 SLRFD 245
Score = 71.3 bits (167), Expect = 8e-13
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2
Query: 680 TAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPT 817
T++VEPYNS+ TTHTTLEHSDC+F++DNEAIY+I + NL + R PT
Sbjct: 179 TSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGV-RSPT 223
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 290 bits (711), Expect = 1e-78
Identities = 143/245 (58%), Positives = 168/245 (68%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITX 863
+ + + NLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 864 SLRXD 878
SLR D
Sbjct: 239 SLRFD 243
Score = 91.5 bits (217), Expect = 7e-19
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDCAFMVDNEAIYDIC+RNLD++R
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDR 219
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 290 bits (711), Expect = 1e-78
Identities = 143/245 (58%), Positives = 168/245 (68%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITX 863
+ + + NLNR+I Q+VSSIT
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 864 SLRXD 878
SLR D
Sbjct: 239 SLRFD 243
Score = 91.5 bits (217), Expect = 7e-19
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P TAVVEPYNSI TTHTTLEHSDCAFMVDNEAIYDIC+RNLD++R
Sbjct: 171 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDR 219
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 274 bits (673), Expect = 4e-74
Identities = 137/245 (55%), Positives = 160/245 (65%), Gaps = 1/245 (0%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXX 686
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPA
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 687 XXXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITX 863
+ +S + NLNR+I Q+VSSIT
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITA 237
Query: 864 SLRXD 878
SLR D
Sbjct: 238 SLRFD 242
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +2
Query: 680 TAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPT 817
T+VVEPYNSI TTHTTLEHSDC+FMVDNEAIYDICRRNL + R PT
Sbjct: 176 TSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSR-PT 220
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 271 bits (665), Expect = 4e-73
Identities = 135/244 (55%), Positives = 160/244 (65%), Gaps = 1/244 (0%)
Frame = +3
Query: 150 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 329
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 330 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 509
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 510 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXXX 689
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPA
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 690 XXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITXS 866
+ L+ + NLNRL+ QI+SSIT S
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITAS 247
Query: 867 LRXD 878
LR +
Sbjct: 248 LRFE 251
Score = 85.0 bits (201), Expect = 6e-17
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPT 817
P T++VEPYNSI THTTLEHSDC FMVDNEAIYDICRRNLD+ R PT
Sbjct: 179 PAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLAR-PT 229
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 255 bits (624), Expect = 4e-68
Identities = 129/250 (51%), Positives = 157/250 (62%), Gaps = 7/250 (2%)
Frame = +3
Query: 150 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 329
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 330 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 509
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 510 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXXX 689
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPA
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 690 XXXXXXXXXXXXXXXXXXXXXWSTMKPSMTSAAVISTLSAXLH-------NLNRLIGQIV 848
S + + A+ LH NLNRLI Q+V
Sbjct: 185 VEPYNSILTTHTTLEL------SDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVV 238
Query: 849 SSITXSLRXD 878
SSIT SLR D
Sbjct: 239 SSITASLRFD 248
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 808
P T+VVEPYNSI TTHTTLE SDC+FMVDNEAIYD+CR+ L +ER
Sbjct: 176 PAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVER 224
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 227 bits (556), Expect = 6e-60
Identities = 115/223 (51%), Positives = 140/223 (62%), Gaps = 1/223 (0%)
Frame = +3
Query: 213 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 392
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 393 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 572
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 573 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 752
LLMERLS +YGKK KLEFAIYPA
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 753 WSTMKPSMTSAAVISTLSAXLH-NLNRLIGQIVSSITXSLRXD 878
+ L+ + NLNRL+ QI+SSIT SLR +
Sbjct: 181 MVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFE 223
Score = 85.0 bits (201), Expect = 6e-17
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 662 PRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPT 817
P T++VEPYNSI THTTLEHSDC FMVDNEAIYDICRRNLD+ R PT
Sbjct: 151 PAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLAR-PT 201
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 147 bits (356), Expect = 1e-35
Identities = 72/174 (41%), Positives = 101/174 (58%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPS 172
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P VVEPYN+ + H +E++D F +DNEA+YDIC R L + PT + +H
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSN-PTYGDLNH 227
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 146 bits (353), Expect = 2e-35
Identities = 72/174 (41%), Positives = 102/174 (58%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPS 172
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P VVEPYN+ + H +E++D + +DNEA+YDIC R L + PT + +H
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTN-PTYGDLNH 227
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 144 bits (350), Expect = 6e-35
Identities = 71/174 (40%), Positives = 102/174 (58%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPS 172
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P VVEPYN+ + H +E++D + +DNEA+YDIC R L + PT + +H
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTN-PTYGDLNH 227
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 143 bits (346), Expect = 2e-34
Identities = 70/174 (40%), Positives = 101/174 (58%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
+RK A+ LQGF + H LL+ ++ +Y + F++ P+
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 172
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P VVEPYN+ + H +E++D F +DNEA+YDIC R L + PT + +H
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKL-TTPTYGDLNH 227
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 143 bits (346), Expect = 2e-34
Identities = 70/174 (40%), Positives = 101/174 (58%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
+RK A+ LQGF + H LL+ ++ +Y + F++ P+
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 172
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P VVEPYN+ + H +E++D F +DNEA+YDIC R L + PT + +H
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKL-TTPTYGDLNH 227
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 142 bits (344), Expect = 3e-34
Identities = 69/174 (39%), Positives = 98/174 (56%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPS 172
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P VVEPYN+ + H +E++D F +DNEA+YDIC R L + PT + +H
Sbjct: 170 VPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL-TTPTYGDLNH 227
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 126 bits (305), Expect = 2e-29
Identities = 66/174 (37%), Positives = 96/174 (55%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPS 172
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P A VVEPYN+I + +++ D F +DNEAI+DIC+ NL +E T + +H
Sbjct: 170 IPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNH 228
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 126 bits (305), Expect = 2e-29
Identities = 66/174 (37%), Positives = 96/174 (55%)
Frame = +3
Query: 147 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 326
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 327 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 506
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 507 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPA 668
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPS 172
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 659 LPRASGXTAVVEPYNSIXTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERXPTQPESSH 835
+P A VVEPYN+I + +++ D F +DNEAI+DIC+ NL +E T + +H
Sbjct: 170 IPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNH 228
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 82.6 bits (195), Expect = 3e-16
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = +3
Query: 159 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 338
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 339 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 509
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 510 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 662
I + A+ L G L H LL+ERL + KK ++++
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVF 174
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 82.6 bits (195), Expect = 3e-16
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = +3
Query: 159 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 338
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 339 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 509
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 510 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIY 662
I + A+ L G L H LL+ERL + KK ++++
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVF 174
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 175 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 330
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical
protein Y17G7B.20 protein.
Length = 294
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +1
Query: 508 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTARSLNWSSPSTPRLRXH 681
ES+SS TS VC D S SVE P L W +SP + S N +SPS P ++ H
Sbjct: 56 ESSSSSTSHRVCTDEEPSFLSVEEPKLEPS---WLMSP---SESENPASPS-PYMQEH 106
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 189 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 368
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 369 VDE 377
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 189 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 368
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 369 VDE 377
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 189 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 368
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 369 VDE 377
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 437 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 342
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,968,771
Number of Sequences: 27780
Number of extensions: 409579
Number of successful extensions: 1044
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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