Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_P14
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 43 4e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 43 4e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 43 4e-04
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.004
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.018
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 37 0.018
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 37 0.018
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.018
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.67
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.7
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 42.7 bits (96), Expect = 4e-04
Identities = 31/92 (33%), Positives = 31/92 (33%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKFXTX 797
PPP G PPPPP P GG PPPGG GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGL---PPISGGPPPPPP---- 763
Query: 798 PPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXP 893
PP G P F GPPPP P P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 35.5 bits (78), Expect = 0.055
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Frame = +3
Query: 654 PPPPPXKXKKXXXPLXXGGXXFXPP----PGGXVXXXXXXGGXXXKKKFXTXPPX--GXP 815
P PPP K GG PP P GG PP G P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 816 KKXXGGXXXVFNXGPPPPXXPPKXXPP 896
G + GPPPP PP PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 34.3 bits (75), Expect = 0.13
Identities = 31/90 (34%), Positives = 31/90 (34%)
Frame = +3
Query: 654 PPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGG 833
PPPPP P GG PPPGG GG PP G P GG
Sbjct: 713 PPPPPG------LPPITGGPPPPPPPGGL---PPITGGPPPPP-----PPGGLP-PISGG 757
Query: 834 XXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PPP PP PP GG P
Sbjct: 758 PPP---PPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Frame = +3
Query: 573 PXGGGXXHFLAXKKTPPPXGE----XXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPP 731
P GG PPP G PPPPP P GG PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 42.7 bits (96), Expect = 4e-04
Identities = 31/92 (33%), Positives = 31/92 (33%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKFXTX 797
PPP G PPPPP P GG PPPGG GG
Sbjct: 714 PPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGL---PPISGGPPPPPP---- 763
Query: 798 PPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXP 893
PP G P F GPPPP P P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 35.5 bits (78), Expect = 0.055
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Frame = +3
Query: 654 PPPPPXKXKKXXXPLXXGGXXFXPP----PGGXVXXXXXXGGXXXKKKFXTXPPX--GXP 815
P PPP K GG PP P GG PP G P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 816 KKXXGGXXXVFNXGPPPPXXPPKXXPP 896
G + GPPPP PP PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 34.3 bits (75), Expect = 0.13
Identities = 31/90 (34%), Positives = 31/90 (34%)
Frame = +3
Query: 654 PPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGG 833
PPPPP P GG PPPGG GG PP G P GG
Sbjct: 713 PPPPPG------LPPITGGPPPPPPPGGL---PPITGGPPPPP-----PPGGLP-PISGG 757
Query: 834 XXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PPP PP PP GG P
Sbjct: 758 PPP---PPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Frame = +3
Query: 573 PXGGGXXHFLAXKKTPPPXGE----XXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPP 731
P GG PPP G PPPPP P GG PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 42.7 bits (96), Expect = 4e-04
Identities = 31/92 (33%), Positives = 31/92 (33%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKFXTX 797
PPP G PPPPP P GG PPPGG GG
Sbjct: 297 PPPPGLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGL---PPISGGPPPPPP---- 346
Query: 798 PPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXP 893
PP G P F GPPPP P P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 35.5 bits (78), Expect = 0.055
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Frame = +3
Query: 654 PPPPPXKXKKXXXPLXXGGXXFXPP----PGGXVXXXXXXGGXXXKKKFXTXPPX--GXP 815
P PPP K GG PP P GG PP G P
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
Query: 816 KKXXGGXXXVFNXGPPPPXXPPKXXPP 896
G + GPPPP PP PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 34.3 bits (75), Expect = 0.13
Identities = 31/90 (34%), Positives = 31/90 (34%)
Frame = +3
Query: 654 PPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGG 833
PPPPP P GG PPPGG GG PP G P GG
Sbjct: 296 PPPPPG------LPPITGGPPPPPPPGGL---PPITGGPPPPP-----PPGGLP-PISGG 340
Query: 834 XXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PPP PP PP GG P
Sbjct: 341 PPP---PPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Frame = +3
Query: 573 PXGGGXXHFLAXKKTPPPXGE----XXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPP 731
P GG PPP G PPPPP P GG PPP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/106 (32%), Positives = 36/106 (33%), Gaps = 1/106 (0%)
Frame = +3
Query: 609 KKTPPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKF 788
K+ PP G PPPPP K PL G PPP G
Sbjct: 228 KRQAPPAGSP-----PPPPPPKGSP---PLAGSGSP-PPPPAAGSPPPPRTGSPPP---- 274
Query: 789 XTXPPXGXPKKXX-GGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PP G P GG G PPP PP+ PP G PP
Sbjct: 275 ---PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT--GSLPPP 315
Score = 32.7 bits (71), Expect = 0.38
Identities = 29/109 (26%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Frame = +3
Query: 618 PPPXGEXXX--NIXPPPPPXKXK----KXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXK 779
PPP G + PPPPP + P PPP G G
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 780 KKFXTXPPXGX-PKKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PP G P GG G PPP K P T P
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/100 (28%), Positives = 31/100 (31%), Gaps = 4/100 (4%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXX----GGXXXKKK 785
PPP G PPPPP P G PPP G GG
Sbjct: 274 PPPTGS------PPPPPAGGSPP--PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Query: 786 FXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXG 905
+ PP P++ G PP PP PP G
Sbjct: 326 TGSPPPP--PRQKRQAPERSPPTGSPPTGSPPTGRPPRGG 363
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/106 (32%), Positives = 36/106 (33%), Gaps = 1/106 (0%)
Frame = +3
Query: 609 KKTPPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKF 788
K+ PP G PPPPP K PL G PPP G
Sbjct: 249 KRQAPPAGSP-----PPPPPPKGSP---PLAGSGSP-PPPPAAGSPPPPRTGSPPP---- 295
Query: 789 XTXPPXGXPKKXX-GGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PP G P GG G PPP PP+ PP G PP
Sbjct: 296 ---PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT--GSLPPP 336
Score = 32.7 bits (71), Expect = 0.38
Identities = 29/109 (26%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Frame = +3
Query: 618 PPPXGEXXX--NIXPPPPPXKXK----KXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXK 779
PPP G + PPPPP + P PPP G G
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 780 KKFXTXPPXGX-PKKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PP G P GG G PPP K P T P
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/100 (28%), Positives = 31/100 (31%), Gaps = 4/100 (4%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXX----GGXXXKKK 785
PPP G PPPPP P G PPP G GG
Sbjct: 295 PPPTGS------PPPPPAGGSPP--PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Query: 786 FXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXG 905
+ PP P++ G PP PP PP G
Sbjct: 347 TGSPPPP--PRQKRQAPERSPPTGSPPTGSPPTGRPPRGG 384
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/106 (32%), Positives = 36/106 (33%), Gaps = 1/106 (0%)
Frame = +3
Query: 609 KKTPPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKF 788
K+ PP G PPPPP K PL G PPP G
Sbjct: 234 KRQAPPAGSP-----PPPPPPKGSP---PLAGSGSP-PPPPAAGSPPPPRTGSPPP---- 280
Query: 789 XTXPPXGXPKKXX-GGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PP G P GG G PPP PP+ PP G PP
Sbjct: 281 ---PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT--GSLPPP 321
Score = 32.7 bits (71), Expect = 0.38
Identities = 29/109 (26%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Frame = +3
Query: 618 PPPXGEXXX--NIXPPPPPXKXK----KXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXK 779
PPP G + PPPPP + P PPP G G
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 780 KKFXTXPPXGX-PKKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PP G P GG G PPP K P T P
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/100 (28%), Positives = 31/100 (31%), Gaps = 4/100 (4%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXX----GGXXXKKK 785
PPP G PPPPP P G PPP G GG
Sbjct: 280 PPPTGS------PPPPPAGGSPP--PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Query: 786 FXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXG 905
+ PP P++ G PP PP PP G
Sbjct: 332 TGSPPPP--PRQKRQAPERSPPTGSPPTGSPPTGRPPRGG 369
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.018
Identities = 27/105 (25%), Positives = 35/105 (33%), Gaps = 2/105 (1%)
Frame = +3
Query: 615 TPPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPG--GXVXXXXXXGGXXXKKKF 788
TP P + PPPPP + P G PPP G ++
Sbjct: 284 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 789 XTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
P P + ++ PPPP PP PP+ G PP
Sbjct: 344 PGGMPPPPPPRYPSAGPGMY--PPPPPSRPP--APPSGHGMIPPP 384
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 37.1 bits (82), Expect = 0.018
Identities = 31/127 (24%), Positives = 37/127 (29%), Gaps = 2/127 (1%)
Frame = +3
Query: 549 KXXFXFFSPXGGGXXHFLAXKKTPPPXGEXXXNIXP--PPPPXKXKKXXXPLXXGGXXFX 722
K F +P G G + PPP + P PPPP P G
Sbjct: 536 KPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPP--------PPSSGTRGIA 587
Query: 723 PPPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNX 902
P G + PP P G + + PPPP PP P
Sbjct: 588 P---SRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAV 644
Query: 903 GGXTXPP 923
G PP
Sbjct: 645 GAGAPPP 651
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 37.1 bits (82), Expect = 0.018
Identities = 31/127 (24%), Positives = 37/127 (29%), Gaps = 2/127 (1%)
Frame = +3
Query: 549 KXXFXFFSPXGGGXXHFLAXKKTPPPXGEXXXNIXP--PPPPXKXKKXXXPLXXGGXXFX 722
K F +P G G + PPP + P PPPP P G
Sbjct: 362 KPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPP--------PPSSGTRGIA 413
Query: 723 PPPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNX 902
P G + PP P G + + PPPP PP P
Sbjct: 414 P---SRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAV 470
Query: 903 GGXTXPP 923
G PP
Sbjct: 471 GAGAPPP 477
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.018
Identities = 27/105 (25%), Positives = 35/105 (33%), Gaps = 2/105 (1%)
Frame = +3
Query: 615 TPPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPG--GXVXXXXXXGGXXXKKKF 788
TP P + PPPPP + P G PPP G ++
Sbjct: 294 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 789 XTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
P P + ++ PPPP PP PP+ G PP
Sbjct: 354 PGGMPPPPPPRYPSAGPGMY--PPPPPSRPP--APPSGHGMIPPP 394
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.67
Identities = 28/110 (25%), Positives = 35/110 (31%), Gaps = 8/110 (7%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPP--GGXVXXXXXX--GGXXX--- 776
PPP + PPPP F PP GG GG
Sbjct: 254 PPPPQQQQQQFQAPPPPMASHSSISSTPVQQQGFAPPQQFGGPPPSGPPSEYGGYAPPQQ 313
Query: 777 -KKKFXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
+++F PP G P++ G PP PP+ PP PP
Sbjct: 314 QQQQFGAPPPQGAPQQGFGA----------PPQGPPQGGPPQGSFGAPPP 353
Score = 31.9 bits (69), Expect = 0.67
Identities = 30/97 (30%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPP-PGGXVXXXXXXGGXXXKKKFXT 794
PPP N PPP P G P PGG GG +
Sbjct: 368 PPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGY--GPPPPGGPGAPGSYG- 424
Query: 795 XPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXG 905
PP G P GG GPPPP P PP G
Sbjct: 425 -PPQGGP----GGF------GPPPPGGPGAYGPPPTG 450
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 30/111 (27%), Positives = 32/111 (28%), Gaps = 9/111 (8%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXX----PLXXGGXXFXPPPGGXVXXXXXXGGXXXKKK 785
P P G + PPP +K P G P P G G
Sbjct: 134 PGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGPQGDAGTSGQDGVPGLPGP 193
Query: 786 FXTXPPXGXP-----KKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
P G P K G V N PP P PP PP G PP
Sbjct: 194 PGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPP--GPPGPQGPPGPP 242
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 726 PPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPP 896
PPGG GG PP G P G + P P PP PP
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 726 PPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPP 896
PPGG GG PP G P G + P P PP PP
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 618 PPPXGEXXXNIXPPPPPXKXKKXXXPLXXGGXXFXPPPGG 737
PPP + PPPPP P+ G PPPGG
Sbjct: 565 PPPLPQNLSGAPPPPPP------PPPMLGGPPPPPPPPGG 598
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/90 (25%), Positives = 25/90 (27%)
Frame = +3
Query: 654 PPPPPXKXKKXXXPLXXGGXXFXPPPGGXVXXXXXXGGXXXKKKFXTXPPXGXPKKXXGG 833
PPP P K+ PPP + G P P
Sbjct: 512 PPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQN 571
Query: 834 XXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
G PPP PP PP GG PP
Sbjct: 572 LS-----GAPPPPPPP---PPMLGGPPPPP 593
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Frame = +3
Query: 612 KTPPPXGEXXXNIXPPPPPXKXKKXXXPLXXGG------XXFXPPPGGXVXXXXXXGGXX 773
K P G PPPP K PL GG P P G + G
Sbjct: 483 KAQYPTGVFFNQPLPPPPAHPPKIGAHPLVMGGGGGVPMIPMVPMPPGMIGLPPGPPGRR 542
Query: 774 XKKKFXTXPP 803
K +F PP
Sbjct: 543 RKSRFDQPPP 552
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 798 PPXGXPKKXXGGXXXVFNXGPPPPXXPPKXXPPNXGGXTXPP 923
PP P+K G + PPPP P+ PP PP
Sbjct: 123 PPPPPPRKSRAGGS---SPPPPPPPRVPRTPPPRSPPPRRPP 161
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 858 PPPPXXPPKXXPPNXGGXTXPP 923
PPPP PP PP PP
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 858 PPPPXXPPKXXPPNXGGXTXPP 923
PPPP PP PP PP
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPP 24
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,109,033
Number of Sequences: 27780
Number of extensions: 199662
Number of successful extensions: 1452
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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