Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P13
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   3.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   4.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   7.5  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 517 CIVWPPSRWQSLQAKLPENR 576
           C + P S +QSLQ +L EN+
Sbjct: 65  CYLRPASGFQSLQFRLLENK 84


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 517 CIVWPPSRWQSLQAKLPENR 576
           C + P S +QSLQ +L EN+
Sbjct: 125 CYLRPASGFQSLQFRLLENK 144


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 517 CIVWPPSRWQSLQAKLPENR 576
           C + P S +QSLQ +L EN+
Sbjct: 125 CYLRPASGFQSLQFRLLENK 144


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 271 RPIEIKTHSPYSSILDSARVA*KFLQ 194
           +P+ IK  +  SSI+D  +++  F Q
Sbjct: 80  KPVHIKLTNRESSIIDKTKISFNFSQ 105


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 255 KHIVRIHRFWIQHGLHRNSFNSSHI 181
           KH+V +H+  ++     NS  S H+
Sbjct: 231 KHLVNLHKNLVKVAKDHNSLYSLHL 255


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 175 VGYVARVEGISMQPVLNPESMN 240
           VG  A    I M  ++NP+S+N
Sbjct: 248 VGLPAPTSSIMMHHLVNPQSLN 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,803
Number of Sequences: 336
Number of extensions: 4180
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)