Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P13
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        29   0.076
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        29   0.076
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        29   0.076
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   8.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   8.8  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   8.8  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   8.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 0.076
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 91  SGGLLMWLKSVCKSLVFGLPIGVT 162
           +GG + W K +     FGLP+GVT
Sbjct: 247 NGGEIAWTKVIYVKRFFGLPVGVT 270


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 0.076
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 91  SGGLLMWLKSVCKSLVFGLPIGVT 162
           +GG + W K +     FGLP+GVT
Sbjct: 247 NGGEIAWTKVIYVKRFFGLPVGVT 270


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 0.076
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 91  SGGLLMWLKSVCKSLVFGLPIGVT 162
           +GG + W K +     FGLP+GVT
Sbjct: 247 NGGEIAWTKVIYVKRFFGLPVGVT 270


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 490 KKQAQRCCCRGCDLCD 443
           KKQ    CC  CD C+
Sbjct: 459 KKQQGDTCCWVCDQCE 474


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 490 KKQAQRCCCRGCDLCD 443
           KKQ    CC  CD C+
Sbjct: 549 KKQQGDTCCWVCDQCE 564


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = -1

Query: 257 KNT*SVFIDSGFSTGCIEIPSTLAT*PTVSRMVTPIGKPKTRDLHTLLSH 108
           KN    ++D G     I+    L     +S    P+GK     LH  L+H
Sbjct: 213 KNIMKFWLDKGIDGFRIDAVPHLFESANISLDEPPLGKNLNLSLHASLNH 262


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 409 KIPEGHCWVEGDHTGHTLDSNTFGPVSLXLVNARAV 516
           + P GH  ++G     +L+S  FG     L+  + V
Sbjct: 29  RAPTGHQEMQGKQNSASLNSENFGIFKRALMGFQGV 64


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 409 KIPEGHCWVEGDHTGHTLDSNTFGPVSLXLVNARAV 516
           + P GH  ++G     +L+S  FG     L+  + V
Sbjct: 29  RAPTGHQEMQGKQNSASLNSENFGIFKRALMGFQGV 64


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 409 KIPEGHCWVEGDHTGHTLDSNTFGPVSLXLVNARAV 516
           + P GH  ++G     +L+S  FG     L+  + V
Sbjct: 29  RAPTGHQEMQGKQNSASLNSENFGIFKRALMGFQGV 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,075
Number of Sequences: 438
Number of extensions: 4419
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)