Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_P12
(891 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 27 0.20
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 25 0.80
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 24 1.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.4
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 23 4.3
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.6
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 27.1 bits (57), Expect = 0.20
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 693 HFQFIXLVENTDETYCVDNEALYDICFRTLK 785
H+Q I ++ + TY +D A+ D C+ T++
Sbjct: 1354 HWQKIIIIVMSSVTYGIDTVAVCDACYSTIE 1384
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 25.0 bits (52), Expect = 0.80
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 406 VFGQSGAGNNW-AKGHYTEGAELVDSVLDVVRKEAESCDCLQGIPT 540
+ + G N + A+ Y G+E S++ + + +C C G PT
Sbjct: 839 ILAEGGCPNLYDARKPYVNGSEYHPSIVSLGEYKCVTCKCENGKPT 884
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 79 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 79 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 548 SVSVGXPWRQSHDSASFRTTSKTESTSSAPS 456
SVS P + + +AS +S STSS S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 79 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 548 SVSVGXPWRQSHDSASFRTTSKTESTSSAPS 456
SVS P + + +AS +S STSS S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 79 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 548 SVSVGXPWRQSHDSASFRTTSKTESTSSAPS 456
SVS P + + +AS +S STSS S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 79 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 548 SVSVGXPWRQSHDSASFRTTSKTESTSSAPS 456
SVS P + + +AS +S STSS S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 35 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 67
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 548 SVSVGXPWRQSHDSASFRTTSKTESTSSAPS 456
SVS P + + +AS +S STSS S
Sbjct: 104 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 134
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 79 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R AS + P Q+H SAS + T ST A
Sbjct: 79 QRLASTHLQSPNTQTHPSASCKYADSTSSTGVA 111
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 548 SVSVGXPWRQSHDSASFRTTSKTESTSSAPS 456
SVS P + + +AS +S STSS S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 175 NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 297
N+I + W + D G AYHGD + E I ++A
Sbjct: 911 NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 475 DSVLDVVRKEAESCDCLQGIPTDTLARRRHRFRY 576
D V RK AE C LQG + +R+ R+
Sbjct: 233 DVVASNSRKTAEMCYKLQGFYPEEAPQRKELLRF 266
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 560 RRRASVSVGXPWRQSHDSASFRTTSKTESTSSA 462
+R A + P Q+H SAS + T ST A
Sbjct: 79 QRLAPTHLQSPNTQTHPSASCKYADSTSSTGVA 111
Score = 22.2 bits (45), Expect = 5.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 548 SVSVGXPWRQSHDSASFRTTSKTESTSSAPS 456
SVS P + + +AS +S STSS S
Sbjct: 148 SVSTSPPGKPATSTASQNLSSPASSTSSTSS 178
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,487
Number of Sequences: 336
Number of extensions: 3985
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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