Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_P11
(988 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 41 0.001
03_02_0484 + 8805053-8805538 41 0.002
03_02_0483 - 8804021-8804485 41 0.002
03_02_0478 + 8775892-8776377 40 0.004
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 38 0.016
01_01_0229 - 1943473-1943922 37 0.022
01_01_0231 + 1951047-1951499 37 0.028
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 36 0.038
01_01_0227 + 1933247-1933699 35 0.11
02_02_0077 - 6586638-6587165 34 0.15
01_05_0636 + 23852985-23853142,23853253-23853445,23853910-238540... 33 0.35
05_03_0545 - 15244647-15245147,15245342-15245635 31 1.1
07_01_1102 - 10129913-10130025,10130558-10130650,10130824-101309... 30 3.3
07_01_1127 + 10456895-10457388,10457488-10458112 29 5.7
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 7.5
09_03_0036 + 11772940-11773171,11774995-11775104 29 7.5
04_01_0252 - 3329712-3331061 29 7.5
03_01_0491 + 3720842-3720958,3721904-3723109 28 10.0
02_02_0489 + 10869482-10871218 28 10.0
>03_02_0485 - 8808139-8808618
Length = 159
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +3
Query: 363 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 518
DV EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 519 SVESRLSSDGVLSVIAPRKVP 581
+++ + +GVL+V P++ P
Sbjct: 128 QIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +3
Query: 363 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 518
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 519 SVESRLSSDGVLSVIAPRKVP 581
+++ + +GVL+V P++ P
Sbjct: 130 QIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +3
Query: 363 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 518
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 519 SVESRLSSDGVLSVIAPRKVP 581
+++ + +GVL+V P++ P
Sbjct: 123 QIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +3
Query: 363 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 518
DV EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 519 SVESRLSSDGVLSVIAPRK 575
+++ + +GVL+V P++
Sbjct: 130 QIKASM-ENGVLTVTVPKE 147
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 37.5 bits (83), Expect = 0.016
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 363 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 518
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 519 SVESRLSSDGVLSVIAPR 572
V++ L +GVL+V P+
Sbjct: 119 QVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 37.1 bits (82), Expect = 0.022
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 363 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 518
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 519 SVESRLSSDGVLSVIAPR 572
V++ + +GVL+V P+
Sbjct: 118 QVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 36.7 bits (81), Expect = 0.028
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 363 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 518
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 519 SVESRLSSDGVLSVIAPR 572
V++ + +GVL+V P+
Sbjct: 119 QVKAGM-ENGVLTVTVPK 135
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 36.3 bits (80), Expect = 0.038
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Frame = +3
Query: 327 IKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ------HGYISRQ---- 476
+ D + ++ D+ + EE+ V D +V+ G+H++++ + G+ +
Sbjct: 137 VMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSS 196
Query: 477 FTRRYALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPIAQTGPVRKEVKDQS 656
+ R ALP+ C V + L +GVL V P+ E ERK+ Q ++K V +
Sbjct: 197 YDMRLALPDECDKSKVRAEL-KNGVLLVTVPK-----TEVERKVIDVQIKYLKKLVMENC 250
Query: 657 NGD 665
+ +
Sbjct: 251 SDE 253
>01_01_0227 + 1933247-1933699
Length = 150
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 423 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPRK 575
V+GK++E+ S +F RR+ LP G + V + + +GVL+V P++
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>02_02_0077 - 6586638-6587165
Length = 175
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 474 QFTRRYALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPIAQTG 626
+F RR+ LPE + V + DGVL+V +K PP + R + + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>01_05_0636 +
23852985-23853142,23853253-23853445,23853910-23854033,
23854285-23854637,23855525-23856530,23856892-23857085,
23857238-23857324
Length = 704
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 352 WNLSLSLLMLEPKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAEMLIHEATR 182
W L+L L+ + K S+V P+ + S S K+F + P ++ IH A +
Sbjct: 647 WRLTLPALLSQDKRIDEDSQVEPQISLLSEEDDPVTSVRKLFMTPPSKKLRIHRAEK 703
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 438 RVCLQPRCSRPPF*QRFLPGRNAGR 364
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>07_01_1102 -
10129913-10130025,10130558-10130650,10130824-10130931,
10131136-10131237,10132064-10132103
Length = 151
Score = 29.9 bits (64), Expect = 3.3
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -3
Query: 479 ELTRYVTMLIFLLLVFAFNHDVAVRRFNRDFFRGEMLDVQVYLE----LILVTFDAGAQG 312
E V++LI L+++FA + + FNR ++ ++V ++ +I D GA G
Sbjct: 15 EAPNSVSLLIVLIILFAPENPTIWKEFNRKESTRQLELLRVGIKNGGMVISDRVDGGASG 74
Query: 311 LEPRQQGDATGGSILC 264
PR QG A+G C
Sbjct: 75 SSPR-QGGASGVKTEC 89
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 438 RVCLQPRCSRPPF*QRFLPGRNAGR 364
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 385 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 480
KKS T TS K TRRRK+++V Y S
Sbjct: 16 KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47
>09_03_0036 + 11772940-11773171,11774995-11775104
Length = 113
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 383 GRNLC*NGGRLHRG*RQTRGEERSAWLH 466
G+NL G+ H G R+ RG+ER LH
Sbjct: 21 GQNLMDRRGKRHEGRRERRGKERGRNLH 48
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 438 RVCLQPRCSRPPF*QRFLPGRNAGR 364
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>03_01_0491 + 3720842-3720958,3721904-3723109
Length = 440
Score = 28.3 bits (60), Expect = 10.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 265 AHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFV 167
A G GC K+F S+ +A+ H A +L F+
Sbjct: 391 ADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423
>02_02_0489 + 10869482-10871218
Length = 578
Score = 28.3 bits (60), Expect = 10.0
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 312 TLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGK-HEEKKDQHGYISRQFTRR 488
TL S K D +++ D P+E + T +G I+ G+ H+EK D+ + R
Sbjct: 443 TLVGSKKGKADNGKLDGDTHSVMPKEATAGTQNGGILTGGENHKEKVDKDANVP-SIRRE 501
Query: 489 YA 494
YA
Sbjct: 502 YA 503
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,009,468
Number of Sequences: 37544
Number of extensions: 490102
Number of successful extensions: 1566
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2881826040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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