Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_P07
(890 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058714-1|AAL13943.1| 493|Drosophila melanogaster LD45235p pro... 116 6e-26
AE014297-2922|AAF55842.1| 493|Drosophila melanogaster CG3593-PA... 116 6e-26
L00968-1|AAA29012.1| 493|Drosophila melanogaster UMP synthase; ... 103 3e-22
X54230-1|CAA38138.1| 78|Drosophila melanogaster UMP synthase p... 64 3e-10
AE014134-2924|AAF53663.1| 665|Drosophila melanogaster CG5790-PA... 30 3.7
>AY058714-1|AAL13943.1| 493|Drosophila melanogaster LD45235p
protein.
Length = 493
Score = 116 bits (278), Expect = 6e-26
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Frame = +3
Query: 237 LQDLAVQLFDAGAVRLEDIEAKVGRRTPIYFDLRVIVSHPKLMVAVSHQLEKLIKD--VH 410
++ LA++LF+ A + D + KVG +P+YFDLRVIVS+P +M VS L + IKD +
Sbjct: 9 MRALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSYPDVMQTVSDLLVEHIKDKQLS 68
Query: 411 HDMICGVPYAALPLAVVISINTDRPMIMKRKETKLYATKKLLEGVYEKNQTCL 569
+CGVPY ALPLA ++S+ PM+++RKE K Y TKKL+EG++ TCL
Sbjct: 69 AKHVCGVPYTALPLATIVSVQQGTPMLVRRKEAKAYGTKKLVEGIFNAGDTCL 121
Score = 38.7 bits (86), Expect = 0.011
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 568 LXVEDVVTSGGSXXXXXXXXXXXXXIVTHAVIXLEREPXWR*CTXSEWYCXETLFTLXNL 747
L VEDVVTSG S +VT AV+ ++RE +LFTL L
Sbjct: 121 LIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGGVANIAKHGVRMHSLFTLSFL 180
Query: 748 VRMLHKAG 771
+ LH+AG
Sbjct: 181 LNTLHEAG 188
>AE014297-2922|AAF55842.1| 493|Drosophila melanogaster CG3593-PA
protein.
Length = 493
Score = 116 bits (278), Expect = 6e-26
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Frame = +3
Query: 237 LQDLAVQLFDAGAVRLEDIEAKVGRRTPIYFDLRVIVSHPKLMVAVSHQLEKLIKD--VH 410
++ LA++LF+ A + D + KVG +P+YFDLRVIVS+P +M VS L + IKD +
Sbjct: 9 MRALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSYPDVMQTVSDLLVEHIKDKQLS 68
Query: 411 HDMICGVPYAALPLAVVISINTDRPMIMKRKETKLYATKKLLEGVYEKNQTCL 569
+CGVPY ALPLA ++S+ PM+++RKE K Y TKKL+EG++ TCL
Sbjct: 69 AKHVCGVPYTALPLATIVSVQQGTPMLVRRKEAKAYGTKKLVEGIFNAGDTCL 121
Score = 38.7 bits (86), Expect = 0.011
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 568 LXVEDVVTSGGSXXXXXXXXXXXXXIVTHAVIXLEREPXWR*CTXSEWYCXETLFTLXNL 747
L VEDVVTSG S +VT AV+ ++RE +LFTL L
Sbjct: 121 LIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGGVANIAKHGVRMHSLFTLSFL 180
Query: 748 VRMLHKAG 771
+ LH+AG
Sbjct: 181 LNTLHEAG 188
>L00968-1|AAA29012.1| 493|Drosophila melanogaster UMP synthase; r-l
gene product protein.
Length = 493
Score = 103 bits (248), Expect = 3e-22
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Frame = +3
Query: 237 LQDLAVQLFDAGAVRLEDIEAKVGRRTPIYFDLRVIVSHPKLMVAVSHQLEKLIKD--VH 410
++ LA++LF+ A + D + KVG +P+YFDLRVIVS VS L + IKD +
Sbjct: 9 MRALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSLGLPQQTVSDLLVEHIKDKQLS 68
Query: 411 HDMICGVPYAALPLAVVISINTDRPMIMKRKETKLYATKKLLEGVYEKNQTCL 569
+CGVPY ALP A ++S+ PM+++RKE K Y TKKL+EG++ TCL
Sbjct: 69 AKHVCGVPYTALPRATIVSVQQGTPMLVRRKEAKAYGTKKLVEGIFNAGDTCL 121
Score = 38.7 bits (86), Expect = 0.011
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = +1
Query: 568 LXVEDVVTSGGSXXXXXXXXXXXXXIVTHAVIXLEREPXWR*CTXSEWYCXETLFTLXNL 747
L VEDVVTSG S +VT AV+ ++RE +LFTL L
Sbjct: 121 LIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGGVANIAKHGVRMHSLFTLSFL 180
Query: 748 VRMLHKAG 771
+ LH+AG
Sbjct: 181 LNTLHEAG 188
>X54230-1|CAA38138.1| 78|Drosophila melanogaster UMP synthase
protein.
Length = 78
Score = 63.7 bits (148), Expect = 3e-10
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = +3
Query: 237 LQDLAVQLFDAGAVRLEDIEAKVGRRTPIYFDLRVIVSHPKLMVAVSHQLEKLIKD--VH 410
++ LA++LF+ A + D + KVG +P+YFDLRVIVS+P +M VS L + IKD +
Sbjct: 9 MRALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSYPDVMQTVSDLLVEHIKDKQLS 68
Query: 411 HDMICGVPY 437
+CGVPY
Sbjct: 69 AKHVCGVPY 77
>AE014134-2924|AAF53663.1| 665|Drosophila melanogaster CG5790-PA
protein.
Length = 665
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 296 GEGRQTNAHLLRPTSHRFAP*ADGSSVTSIGETH*RRSSRYDMWSSIRCTASCSSHLHQH 475
G+ TN + R + RF P A G+ + G H R + + + +CTA + L +
Sbjct: 45 GKSSSTNYNRNRFYNERFVPMASGTMPSVSGTNHHSRHQQLLLQQAPKCTADLNEKLVKI 104
Query: 476 GQTNDHEE 499
+ N ++E
Sbjct: 105 NRQNANKE 112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,678,615
Number of Sequences: 53049
Number of extensions: 596221
Number of successful extensions: 1458
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -