Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P03
         (875 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5KKT5 Cluster: Methylcrotonoyl-Coenzyme A carboxylase ...    34   5.5  
UniRef50_A2QNX2 Cluster: Contig An07c0210, complete genome; n=6;...    33   9.5  

>UniRef50_Q5KKT5 Cluster: Methylcrotonoyl-Coenzyme A carboxylase 1,
           putative; n=3; cellular organisms|Rep:
           Methylcrotonoyl-Coenzyme A carboxylase 1, putative -
           Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 733

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 15/48 (31%), Positives = 30/48 (62%)
 Frame = +3

Query: 531 DSFTRLICNCTSADSEVTLRPDGPYRVPSTITAIFINGCGRISFLSDT 674
           D +++LI +C ++ +E + +  GP ++ STI  IF+NG  ++   S +
Sbjct: 591 DLYSQLIQSCVTSSTEFSAQI-GPKKIQSTIIPIFVNGLEKLHIFSSS 637


>UniRef50_A2QNX2 Cluster: Contig An07c0210, complete genome; n=6;
           Trichocomaceae|Rep: Contig An07c0210, complete genome -
           Aspergillus niger
          Length = 358

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -2

Query: 574 ESALVQLHMSLVNESQLQSSSWQTVTVLLCAREVFNTKIICHHVVQ-RMLNSSRHHFNHA 398
           +++  +L M ++   + + + W    V  CAR V N ++I   V+Q R+L  +R ++ H 
Sbjct: 231 DASEARLQMRMLRRRKERLARWDENDVSTCARAVANCQLINDQVIQIRLLIRAREYWEHE 290

Query: 397 LHTVPRQ 377
            + V  Q
Sbjct: 291 KYNVIAQ 297


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,843,477
Number of Sequences: 1657284
Number of extensions: 16434356
Number of successful extensions: 37101
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 35608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37077
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)