Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P03
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2015|AAF48358.3| 1021|Drosophila melanogaster CG33249-P...    30   4.8  
AY071756-1|AAL49378.1|  151|Drosophila melanogaster RH62806p pro...    29   8.4  
AY070967-1|AAL48589.1|  151|Drosophila melanogaster RE06748p pro...    29   8.4  
AE014134-1551|AAF52700.1|  151|Drosophila melanogaster CG9296-PA...    29   8.4  

>AE014298-2015|AAF48358.3| 1021|Drosophila melanogaster CG33249-PA
           protein.
          Length = 1021

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 664 CRIPSEILSIYVTSRSEMFNTLSSMRELWRGCRFR 768
           C++P ++LSI++    E+   +S M EL    R+R
Sbjct: 165 CQLPQQLLSIWIQREKELLQEISGMGELSGEWRWR 199


>AY071756-1|AAL49378.1|  151|Drosophila melanogaster RH62806p
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 649 DEYHSCRIPSEILSIYVTSRSEMFNTLSSM 738
           D+ H  R+P +IL +   SR   F+T+ SM
Sbjct: 43  DQEHEARVPVKILDMRAVSREINFSTIESM 72


>AY070967-1|AAL48589.1|  151|Drosophila melanogaster RE06748p
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 649 DEYHSCRIPSEILSIYVTSRSEMFNTLSSM 738
           D+ H  R+P +IL +   SR   F+T+ SM
Sbjct: 43  DQEHEARVPVKILDMRAVSREINFSTIESM 72


>AE014134-1551|AAF52700.1|  151|Drosophila melanogaster CG9296-PA
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 649 DEYHSCRIPSEILSIYVTSRSEMFNTLSSM 738
           D+ H  R+P +IL +   SR   F+T+ SM
Sbjct: 43  DQEHEARVPVKILDMRAVSREINFSTIESM 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,321,235
Number of Sequences: 53049
Number of extensions: 780394
Number of successful extensions: 1753
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)