Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_P02
         (970 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   4.2  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   5.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   5.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   5.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   9.6  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   9.6  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 97  NLLHVWALFDTRAGKSQKRXKEGPSSEAD 11
           N++H W   D   G  +KR     S E D
Sbjct: 36  NVIHEWKYIDYDFGSDEKRQAAIQSGEYD 64


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 94  LLHVWALFDTRAGKSQKRXKEGPSSEAD 11
           +LH W  FD   G  ++R     S E D
Sbjct: 33  ILHEWKFFDYDFGSDERRQDAILSGEYD 60


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 94  LLHVWALFDTRAGKSQKRXKEGPSSEAD 11
           +LH W  FD   G  ++R     S E D
Sbjct: 33  ILHEWKFFDYDFGSDERRQDAILSGEYD 60


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 94  LLHVWALFDTRAGKSQKRXKEGPSSEAD 11
           +LH W  FD   G  ++R     S E D
Sbjct: 33  ILHEWKFFDYDFGSDERRQDAILSGEYD 60


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 319 MIKGVTKGFQYKMRAVYAH 375
           M++G+  G QY     Y H
Sbjct: 740 MLRGIASGMQYLAEMNYVH 758


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 7/35 (20%), Positives = 19/35 (54%)
 Frame = -2

Query: 405 TLSGDTVNGEVSIHSTHLVLEAFSYSFNHVSLHVN 301
           ++ G+T   E  ++ +  V   + +S N + +H++
Sbjct: 86  SIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHIS 120


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 17  LTTRAFLXSFLAFSGSCVKQSPNMQQI 97
           LT +A    + AFS SC     N++QI
Sbjct: 63  LTAQAHHRLYPAFSSSCDPVPGNLEQI 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,371
Number of Sequences: 438
Number of extensions: 3394
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31927896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)