Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O23
(884 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683... 236 1e-62
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711... 64 1e-10
03_01_0535 + 4006284-4006418,4006483-4006599,4007363-4007587,400... 48 1e-05
06_01_0729 + 5367796-5368071,5368390-5368483,5368708-5368782,536... 47 2e-05
02_05_0058 + 25478274-25478421,25478963-25479142,25479714-254800... 37 0.019
02_05_0060 + 25484349-25484496,25485514-25485705,25486614-254869... 34 0.17
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 30 2.8
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 29 5.0
04_03_0720 - 19008890-19009204,19009324-19009593 29 5.0
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 29 5.0
10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373 29 6.6
08_01_0975 + 9819387-9821512,9821768-9821910,9822185-9822349,982... 29 6.6
04_01_0376 - 4929447-4929731 29 6.6
06_01_0326 + 2372176-2373057,2373146-2373610 28 8.7
04_03_0594 - 17733827-17735085,17735576-17735642,17736379-177364... 28 8.7
04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268 28 8.7
04_03_0588 + 17595299-17596151,17597519-17597665,17598562-175988... 28 8.7
>07_03_0405 -
17767303-17767665,17767815-17768039,17768115-17768342,
17768607-17768621,17768622-17768810,17769106-17769213,
17769917-17770045
Length = 418
Score = 236 bits (578), Expect = 1e-62
Identities = 115/177 (64%), Positives = 132/177 (74%), Gaps = 5/177 (2%)
Frame = +1
Query: 268 FPAKDEQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQ 447
F A E R PR+++VG+IQ+SIA+PT +QKKAI KVK +ID AG GVNI+C Q
Sbjct: 83 FDADKEYLRQPRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAGDAGVNILCLQ 142
Query: 448 -----ELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKH 612
E W MPFAFCTREK+ WCEFAE DG +T FL++LA KY MVIVS ILERD H
Sbjct: 143 VSQLSEAWTMPFAFCTREKR-WCEFAEPV-DGESTQFLQQLAKKYNMVIVSPILERDVNH 200
Query: 613 SDILWNTAVVISDTGNVIGKHRKNHIPRVGDFIESNYYMEGNTGHPVFATRYGKIAV 783
+I+WNTAVVI + GN+IG HRKNHIPRVGDF ES YYMEGNTGHPVF T YGKI V
Sbjct: 201 GEIVWNTAVVIGNHGNIIGIHRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIGV 257
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 782 LNICFGRHHVLNWMMFGQNGAEXVFNPSATI 874
+NIC+GRHH LNW+ FG NGAE VFNPSAT+
Sbjct: 257 VNICYGRHHPLNWLAFGLNGAEIVFNPSATV 287
>02_04_0096 +
19669428-19669525,19670770-19670818,19671041-19671132,
19671235-19671386,19671478-19671524,19671617-19671650,
19671769-19671935,19672070-19672166,19672239-19672408
Length = 301
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/130 (29%), Positives = 69/130 (53%)
Frame = +1
Query: 394 KKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAM 573
+++I A ++G NI+ QEL+ + FC ++ + + A+ + PT ++LA + +
Sbjct: 32 ERLIREAHKKGANIVLVQELFEGQY-FCQAQRLDFFQRAKPYKGNPTIIRFQKLAKELEV 90
Query: 574 VIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFIESNYYMEGNTGHPV 753
VI S E + ++ +N+ +I G +G +RK+HIP + E Y+ G+TG
Sbjct: 91 VIPVSFFE---EANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKA 147
Query: 754 FATRYGKIAV 783
F T+Y I V
Sbjct: 148 FKTKYATIGV 157
>03_01_0535 +
4006284-4006418,4006483-4006599,4007363-4007587,
4008112-4008205,4008587-4008661,4009045-4009123,
4009385-4009400,4009441-4009584,4009822-4009904,
4010012-4010093
Length = 349
Score = 48.0 bits (109), Expect = 1e-05
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +1
Query: 358 VNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDG--- 528
V K + ++ I+ A G ++ E+WN P++ + E+AE E G
Sbjct: 55 VTADKARNIARAREAIEAAAAGGAKLVLLPEIWNGPYS-----NDSFPEYAEDIEAGGDA 109
Query: 529 -PTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHI 690
P+ + + E+A + +V + E+ + L+NT V G + GKHRK H+
Sbjct: 110 APSFSMMSEVARSLQITLVGGSIS--ERSGNKLYNTCCVFGSDGELKGKHRKIHL 162
>06_01_0729 +
5367796-5368071,5368390-5368483,5368708-5368782,
5368919-5368997,5369155-5369170,5369260-5369346,
5369451-5369533,5369616-5369769
Length = 287
Score = 46.8 bits (106), Expect = 2e-05
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +1
Query: 436 ICFQELWNMPFAFCTREKQPWCEFAESAEDG--PTTTFLRELAIKYAMVIVSSILERDEK 609
+ FQE+WN P++ E P E + G P+ + L E+A + + IV + E+
Sbjct: 16 VLFQEIWNCPYSM---ETLP--SHGEDIDGGASPSVSMLSEVAARRRITIVGGSIP--ER 68
Query: 610 HSDILWNTAVVISDTGNVIGKHRKNHIPRV---GD--FIESNYYMEGNTGHPVFATRYGK 774
S L+NT VI G + KHRK H+ + GD F ES+ + G + T G+
Sbjct: 69 SSGRLFNTCCVIGPDGQIKAKHRKLHLFEIDIPGDITFRESDTFTAGQE-PTIVDTDVGR 127
Query: 775 IAV 783
I +
Sbjct: 128 IGI 130
>02_05_0058 +
25478274-25478421,25478963-25479142,25479714-25480007,
25480261-25480564,25480672-25480751,25480765-25480934
Length = 391
Score = 37.1 bits (82), Expect = 0.019
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Frame = +1
Query: 376 AIFNKVKKIIDVAGQEGVNIICFQELW------NMPFAFC-----TREKQPWCEFAESAE 522
A +K +K++ A G I+ F E++ F + K+ + ++ +A
Sbjct: 47 ATLDKAEKLVAEAAGYGSQIVLFPEVFVGGYPHGSTFGLTIGNRSAKGKEDFHKYHAAAI 106
Query: 523 D--GPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPR 696
D GP T L LA KY + +V ++ER L+NT + G +GKHRK +
Sbjct: 107 DVPGPEVTRLAALAGKYKIFLVMGVVERV---GYTLYNTVLFFDPLGKYLGKHRK--VMP 161
Query: 697 VGDFIESNYYMEGN-TGHPVFATRYGKI 777
G +E ++ G+ + PV+ T GKI
Sbjct: 162 TG--LERVFWGFGDGSTIPVYDTPIGKI 187
>02_05_0060 +
25484349-25484496,25485514-25485705,25486614-25486907,
25487140-25487421,25487571-25487743
Length = 362
Score = 33.9 bits (74), Expect = 0.17
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 526 GPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGD 705
GP T L +A KY + +V ++ER+ L+ + + G +GKHRK +
Sbjct: 114 GPEVTRLAAMAGKYKVFLVMGVIERE---GYTLYCSVLFFDPLGRYLGKHRKLMPTALER 170
Query: 706 FIESNYYMEGNTGHPVFATRYGKI 777
I + +G+T PV+ T GKI
Sbjct: 171 IIWG--FGDGST-IPVYDTPLGKI 191
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/74 (21%), Positives = 31/74 (41%)
Frame = +1
Query: 451 LWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWN 630
+WN+ + +E QP E A +D R++ + + ++ D D+ W+
Sbjct: 765 VWNLEYCLQLQESQPSTETALDLDDS-GAHLPRDIVVARRVAPLAPDASADAAGDDMSWS 823
Query: 631 TAVVISDTGNVIGK 672
+ TGNV +
Sbjct: 824 ETASFTATGNVFSQ 837
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 527 PSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSW 417
PS+ S N F L++N NSW Q+++T W
Sbjct: 628 PSTTASVNLDESQFKLLRNCFQGTSNSWGQVIVTAGW 664
>04_03_0720 - 19008890-19009204,19009324-19009593
Length = 194
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2
Query: 640 QPQCSKVCPNAFRPFLISRTRSPLRT*WRVPEGRSW 533
QP V P +F P L SRT +P WR GRSW
Sbjct: 85 QPPFQVVVPRSFAPLLPSRT-TPATLSWR---GRSW 116
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 500 HHGCFSLVQNAKGIFHNSWKQMMLTPSWP--ATSMIFLTLLKIAFF 369
H C ++++ + G+ N W+ + PS+P SMI L + F
Sbjct: 649 HSSCRNVIERSFGVLKNKWRILFHLPSYPQQKQSMIICACLALHNF 694
>10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373
Length = 814
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Frame = +1
Query: 586 SILERDEKHSDILW--NTAVVISDTGN-----VIGKHRKNHIPRVGDFIESNYYMEGNTG 744
SI RD K S+IL N +SD G V H ++ +++ YY G
Sbjct: 595 SIFHRDVKSSNILLDANYTAKVSDFGASRSVPVDQSHVVTNVQGTFGYLDPEYYQTGQLN 654
Query: 745 HPVFATRYGKIAVEHLLRTAP 807
+G + +E LLR P
Sbjct: 655 EKSDVYSFGVVLLELLLRMQP 675
>08_01_0975 +
9819387-9821512,9821768-9821910,9822185-9822349,
9822382-9822419
Length = 823
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -2
Query: 856 EXXLRSVLSEHHPVQDVVPSEADVQPRSCRIWSQIQDGRCYLPCSSWIR*NRRL*ECGSC 677
E + + SEH ++ V +SC +++ + R + CSSWI ++ C
Sbjct: 189 ETLTKLLYSEHCSLRIVAVCGMGGLGKSCLVYNVFKRERSHFDCSSWISVSQ---SCKMD 245
Query: 676 DVFRS 662
D+FR+
Sbjct: 246 DIFRN 250
>04_01_0376 - 4929447-4929731
Length = 94
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 778 RSCRIWSQIQDGRCYLPCSSW 716
RSC W +Q GRC CS+W
Sbjct: 63 RSCAAW--LQQGRCSAGCSAW 81
>06_01_0326 + 2372176-2373057,2373146-2373610
Length = 448
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 339 RDGMLNYSYLDNSRGSGLLVLGRESVCGDVEVSLLSCSDXRI 214
RD M ++ S G G+ V+G ++ D VS+ +CSD I
Sbjct: 233 RDSMHHFGIRGESDGDGISVMGSSNIWID-HVSMSNCSDGLI 273
>04_03_0594 -
17733827-17735085,17735576-17735642,17736379-17736413,
17736810-17737665
Length = 738
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Frame = +1
Query: 586 SILERDEKHSDILW--NTAVVISDTG--NVIGK---HRKNHIPRVGDFIESNYYMEGNTG 744
S+L RD K S+IL N ++D G +I H +I +++ YY G+
Sbjct: 522 SVLHRDVKSSNILLDANYTAKVADFGASRLIPNDQTHVFTNIQGTFGYLDPEYYHTGHLN 581
Query: 745 HPVFATRYGKIAVEHLLRTAPRLELD 822
+G + +E LLR P E +
Sbjct: 582 EKSDVYSFGVVLLELLLRRQPIFECE 607
>04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268
Length = 667
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +1
Query: 586 SILERDEKHSDILW--NTAVVISDTG--NVIGK---HRKNHIPRVGDFIESNYYMEGNTG 744
S+L RD K S+IL N +SD G +I H +I +++ YY G+
Sbjct: 451 SVLHRDVKSSNILLDANYTAKVSDFGVSRLIPNDQTHVFTNIQGTFGYLDPEYYHTGHLN 510
Query: 745 HPVFATRYGKIAVEHLLRTAP 807
+G + +E LLR P
Sbjct: 511 EKSDVYSFGVVLLELLLRKQP 531
>04_03_0588 +
17595299-17596151,17597519-17597665,17598562-17598837,
17599108-17599805
Length = 657
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +1
Query: 586 SILERDEKHSDILW--NTAVVISDTG--NVIGK---HRKNHIPRVGDFIESNYYMEGNTG 744
S+L RD K S+IL N +SD G +I H +I +++ YY G+
Sbjct: 441 SVLHRDVKSSNILLDSNYTAKVSDFGASRLIPNDQTHVFTNIQGTFGYLDPEYYHTGHLN 500
Query: 745 HPVFATRYGKIAVEHLLRTAP 807
+G + +E LLR P
Sbjct: 501 EKSDVYSFGVVLLELLLRKQP 521
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,685,012
Number of Sequences: 37544
Number of extensions: 516348
Number of successful extensions: 1437
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -