Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O20
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 32 0.70
08_02_1242 - 25513665-25513997,25514184-25514257,25514317-255144... 31 1.2
07_03_0794 + 21562995-21563004,21564151-21565799 30 2.8
08_02_0746 + 20721421-20721649,20722912-20722971,20723318-207233... 29 3.8
06_01_0376 + 2709254-2711267,2711311-2711450 29 3.8
05_05_0267 - 23704249-23704401,23704476-23704780,23704967-237056... 29 3.8
02_01_0080 + 558915-558962,559016-559209,559644-559965 29 3.8
11_04_0407 + 17335773-17335777,17335930-17336635,17336844-173375... 29 5.0
06_01_0966 - 7439901-7440034,7440529-7440610,7440634-7440927,744... 29 6.6
01_06_0895 - 32804433-32804744,32804948-32805163,32805301-328056... 29 6.6
01_01_0660 + 5029070-5029177,5029303-5029398,5029494-5029556,502... 29 6.6
04_03_1016 + 21742060-21742219,21742301-21742596,21742705-217427... 28 8.7
04_03_0501 + 16593710-16593886,16595255-16595311,16595748-165974... 28 8.7
>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 402 IMESFLGGKYECDNTNQLEHEFYTNDNQFNTQTLLSEASTPRTANPTD-KKSNKQTCQVN 578
++E G+Y+ N N +H +D+ T E S P T P K+N + +
Sbjct: 1234 VIEKVKEGRYKSANINDRKHIERVHDSANKMSTTSVEKSIPETVKPMKATKNNSKATDYH 1293
Query: 579 NTKTKNFDN 605
T+ K+ D+
Sbjct: 1294 GTENKSPDS 1302
>08_02_1242 -
25513665-25513997,25514184-25514257,25514317-25514422,
25514507-25514557,25514629-25514700,25514785-25514924,
25515109-25515162,25515328-25515435,25515652-25515747,
25515828-25515887,25516234-25516293,25517581-25517809
Length = 460
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/101 (18%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 480 NQFNTQTLLSEASTPRTANPTDKKSNKQTCQVNNTKTKNFDNTELKYAKKQMDDAVTYLK 659
+Q ++ +SE+ + K +++Q +++ +T+N +NT+ KKQ + + K
Sbjct: 16 SQMEGESTMSESKSSSRGKKKSKTTSEQKVEIHTKETQNLENTK----KKQEEGKIKRNK 71
Query: 660 NVAAQK--RESDECELYGRLLAKKLRKLDEHQRDVAMHEID 776
Q ++ EC+ + K + + + ++ + EI+
Sbjct: 72 KAPVQGVIQKDKECKSSKEIEGKNIGGIQKEKQSKSSMEIE 112
>07_03_0794 + 21562995-21563004,21564151-21565799
Length = 552
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +3
Query: 417 LGGKYECDNTNQLEHEFYTNDNQFNTQTLLSEASTPRTANPTDKKS 554
L ++ECDN + L + T DNQ +T+T+ ++ +P A+ + +++
Sbjct: 29 LSSQFECDNLSALTN---TPDNQSSTETISAQPISPLEADSSYRQA 71
>08_02_0746 +
20721421-20721649,20722912-20722971,20723318-20723377,
20723458-20723553,20723764-20723871,20724037-20724090,
20724275-20724414,20724499-20724570,20724642-20724692,
20724943-20725017,20725205-20725585,20726372-20727604,
20727679-20727831
Length = 903
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 480 NQFNTQTLLSEASTPRTANPTDKKSNKQTCQVNNTKTKNFDNTELKYAKKQMDDAVTYLK 659
+Q ++ +SE+ + K + +Q +++ +T+N +NT+ KKQ + + K
Sbjct: 16 SQMEGESTMSESKSSSRGKKKSKTTFEQKVEIHTKETQNLENTK----KKQEEGKIKRNK 71
Query: 660 NVAAQK--RESDECELYGRLLAKKLRKLDEHQRDVAMHEID 776
Q ++ EC+ + K + + + ++ + EI+
Sbjct: 72 KAPVQGVIQKDKECKSSKEIEGKNIGGIQKEKQSKSSMEIE 112
>06_01_0376 + 2709254-2711267,2711311-2711450
Length = 717
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 567 CQVNNTKTKNFDNTELKYAKKQMDDAVTY---LKNVAAQKRESDECELYGRLL 716
C+V N + F + K + DA+TY ++ + +KR +D CEL+ +L
Sbjct: 409 CKVGNLDSA-FQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
>05_05_0267 -
23704249-23704401,23704476-23704780,23704967-23705674,
23707772-23708114,23708300-23708374,23708625-23708675,
23708747-23708818,23708903-23709042,23709227-23709280,
23709446-23709553,23709769-23709864,23709946-23710005,
23710352-23710411,23711699-23711927
Length = 817
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 480 NQFNTQTLLSEASTPRTANPTDKKSNKQTCQVNNTKTKNFDNTELKYAKKQMDDAVTYLK 659
+Q ++ +SE+ + K +++Q +++ +T+N NT+ KKQ + + K
Sbjct: 16 SQMEGESTMSESKSSSRGKKKSKTTSEQKVEIHTKETQNLANTK----KKQEEGKIKRNK 71
Query: 660 NVAAQK--RESDECELYGRLLAKKLRKLDEHQRDVAMHEID 776
Q ++ EC+ + K + + + ++ + EI+
Sbjct: 72 KAPVQGVIQKDKECKSSKEIEGKNIGGIQKEKQSKSSMEIE 112
>02_01_0080 + 558915-558962,559016-559209,559644-559965
Length = 187
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/72 (23%), Positives = 41/72 (56%)
Frame = +3
Query: 546 KKSNKQTCQVNNTKTKNFDNTELKYAKKQMDDAVTYLKNVAAQKRESDECELYGRLLAKK 725
K+++++ + + K + +LK +K+ +DA K +KR+++E E ++ A+K
Sbjct: 59 KEADRKETEEEGNQVKKITSQQLKRKRKKEEDASEKKKK---KKRQTEEAEAEKKIEARK 115
Query: 726 LRKLDEHQRDVA 761
+K + ++R +A
Sbjct: 116 AKK-EAYERYLA 126
>11_04_0407 +
17335773-17335777,17335930-17336635,17336844-17337542,
17340710-17340724,17341479-17342126
Length = 690
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 405 MESFLGGKYECDNTNQLEHEFYTNDNQFNTQTLLSEASTPRTANPTDKKSN 557
++ FLG + + N+LEHE +N + T L AST T + TD +N
Sbjct: 507 VKQFLGDNAQTSSLNRLEHEEQSNYTELQTTLLHVLAST--TEHGTDCLAN 555
>06_01_0966 -
7439901-7440034,7440529-7440610,7440634-7440927,
7441081-7441308,7442803-7442963,7444518-7444608
Length = 329
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 645 VTYLKNVAAQKRESDECELYGRLLAKKLRKLDEHQRDVAMHEIDNIMFRARM 800
+T+L + D+C L+G + KKL + + HE+ I+ R+++
Sbjct: 141 LTFLGRKNEDVSDGDQCTLHGLMEKKKLNNFNMPVYMPSTHEVKTIIMRSKL 192
>01_06_0895 -
32804433-32804744,32804948-32805163,32805301-32805642,
32805778-32806020,32806130-32806582,32806898-32807113,
32808360-32808432,32808750-32808790,32809027-32809118,
32809222-32809333,32810003-32810078,32810154-32810301,
32811195-32811336,32812120-32812196,32813568-32813619
Length = 864
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -2
Query: 677 FLSRNVLQIRYSIVHLFLCVFQFGIVEVLRFR 582
FL+++++ + S VHL LC+ G+ ++L F+
Sbjct: 244 FLNKDIVSLNQSAVHLLLCL-MLGLYKLLSFK 274
>01_01_0660 +
5029070-5029177,5029303-5029398,5029494-5029556,
5029836-5029913,5030446-5030614,5030797-5031180,
5031959-5032042,5032143-5032288,5032810-5033070,
5033147-5033328,5033421-5033586,5033650-5033703,
5034702-5034965,5035088-5035303,5035388-5035540,
5035630-5035827
Length = 873
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 142 WSNDLVLEFLELYRREQHLWXPKHPQHKNRIENNNAWLRIQSSLSIHCSVVDLKKKEGIA 321
WS D ++ F E YRR W + + +++ S+H + + L ++EG A
Sbjct: 47 WSKDELMRFYEAYRRHGKNWKKVSASVGGKSADT-----VEALYSVHRTFLSLPEREGTA 101
Query: 322 DDFL 333
F+
Sbjct: 102 MGFV 105
>04_03_1016 +
21742060-21742219,21742301-21742596,21742705-21742758,
21743480-21743503
Length = 177
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +3
Query: 414 FLGGKYECDNTNQLEHEFYTNDNQFNTQTLLSEASTPRTANPTDKKSNKQTCQVNNTKTK 593
F+G +E TN + HE++ D N S+ T++ + K+S+K+ ++T++K
Sbjct: 104 FIGEPFEAIKTNWVMHEYHLMDGSTN-------CSSSSTSSSSSKRSHKKKGH-SDTESK 155
Query: 594 NF 599
N+
Sbjct: 156 NW 157
>04_03_0501 +
16593710-16593886,16595255-16595311,16595748-16597469,
16599045-16599326,16599521-16599637,16599655-16600365
Length = 1021
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 543 DKKSNKQTCQVNNTKT----KNFDNTELKYAKKQMDDAVTYLKNVAAQKRESDE 692
DKK + Q N T + ++FD ELK A +++ V YL+ + ES E
Sbjct: 624 DKKKGSKR-QANGTPSVPEIEDFDEDELKEANSMLEEEVQYLRVAMGHESESLE 676
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,947,700
Number of Sequences: 37544
Number of extensions: 366467
Number of successful extensions: 1029
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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