Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_O20
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 34 0.12
U88170-9|AAB42243.2| 348|Caenorhabditis elegans Serpentine rece... 33 0.27
U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical pr... 31 1.5
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81483-3|CAB03961.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical pr... 29 4.5
AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box transcr... 29 4.5
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 7.8
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 7.8
U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical p... 28 7.8
U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical p... 28 7.8
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 7.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.8
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.12
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Frame = +3
Query: 474 NDNQFNTQTLLSEASTPRTANPT--DKKSN---KQTCQVNN---TKTKNFDNTELKYAKK 629
N + T+T S P+T P +K SN K+T NN + K N E+K KK
Sbjct: 31 NKKETKTETKKSHDCPPQTIEPVKDEKNSNSEEKKTTSSNNEVPPQKKLIGNDEVKKEKK 90
Query: 630 QMDDAVTYLKNVAAQ---KRESDECELYGRLLAKKLRKLDEHQ 749
+ +D + +K A++ K+ D+ + +L +KLR+ + Q
Sbjct: 91 KSEDDLLDVKKTASKEDDKKRMDKKDPSKKLSKEKLREEKKEQ 133
>U88170-9|AAB42243.2| 348|Caenorhabditis elegans Serpentine
receptor, class h protein51 protein.
Length = 348
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = -2
Query: 659 LQIRYSIVHLFLCVFQFGIVEVLRFRIVHLTRLFVGFLVGRVRGPRRARFGQ*RLSVELI 480
++I + I+H FLC+ + +V+ R L F + +V P F + ++
Sbjct: 226 IEIAFFIIHSFLCLRKSQVVDTFSVRTKQLQIAFFRAAIAQVAAPLLVLFVPFIMLGYIL 285
Query: 479 VISIELMFQLVGVVTFIFPAKKAF 408
V S L L+ V PA AF
Sbjct: 286 VTSANLQ-GLINVCILFIPANSAF 308
>U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical
protein T20F7.6 protein.
Length = 423
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 533 EPDRQEIQQTNVSSEQYENEELRQYRIEIRKETNGR 640
E + E+ T +++E+ N +RQYR ++KE N R
Sbjct: 118 EKESTELDMTQIANEEIGNLSIRQYRELVKKEGNLR 153
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 417 LGGKYECDNTNQLEHEFYTNDNQFNTQTLLSEASTPRTANPTDKKSN---KQTCQVNNTK 587
+ GK + + TN++ TN FN++ E + DKK + K T + ++K
Sbjct: 90 ISGK-DAEETNKMLQMLGTNATSFNSRNGTGEEKKKKKVKKEDKKGDEEEKSTTKKRSSK 148
Query: 588 TKNFDNTELKYAKKQMDDAVTYLKNVAAQKR 680
+ + E KK ++ K+ ++++R
Sbjct: 149 KETHEEKEKSEKKKSAEEKEKKKKSSSSKER 179
>Z81483-3|CAB03961.1| 152|Caenorhabditis elegans Hypothetical
protein C43D7.5 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 426 KYECDNTNQLEHEFYTNDNQFNTQTLLSEASTPRTANPTDKKSNKQTCQVN-NTKTKNFD 602
K CDNTN H DN NT T +T N D +N++ VN + N +
Sbjct: 16 KDNCDNTNTYSHTVDRKDNFDNTTT------NTKTVNRNDNCNNQEEGDVNMYRRNDNCN 69
Query: 603 NTE 611
N E
Sbjct: 70 NRE 72
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 615 KYAKKQMDDAVTY-LKNVAAQKRE--SDECELYGRLLAKKLRKLDEHQRDVAMHEIDNIM 785
++ ++ D+ + Y L+ V E +DE LY R++ KL+K+D +R H+I +++
Sbjct: 320 RHRQQTADNVMRYHLQQVGRVALEWLNDEDLLYSRIIGLKLKKMDPKKRKKVRHQIMSLL 379
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = +3
Query: 489 NTQTLLSEASTPRTANPTDKK-SNKQTCQVNNTKTKNFDNTELKYAKKQMDDAVTYLKNV 665
N +T LSE ++P+T N T+ S + ++++ KTK +N + + K +++ VT LK
Sbjct: 64 NLETQLSEKNSPKTPNVTENMWSLEYESKLSDAKTK-IENQKKEINK--LNEKVTQLKEE 120
Query: 666 ---AAQKRESDECELYGRLLAKKLRKLDEH 746
+ Q +++E ++ ++RK+ E+
Sbjct: 121 QQNSNQLSKNNESDMRNENRLAEVRKVQEN 150
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/101 (20%), Positives = 53/101 (52%)
Frame = +3
Query: 513 ASTPRTANPTDKKSNKQTCQVNNTKTKNFDNTELKYAKKQMDDAVTYLKNVAAQKRESDE 692
AST +A+P+ + K T + + + + +T++ A++++ D ++ + AQ+ +E
Sbjct: 5 ASTASSADPSKPTAQKLTEESDEKTLRKYFSTKVDDAQQKVADKSQNVRRLQAQR---NE 61
Query: 693 CELYGRLLAKKLRKLDEHQRDVAMHEIDNIMFRARMQTGWH 815
R+L ++L++L H++ + E+ M + ++ H
Sbjct: 62 LNTKVRMLKEELQQL--HEQGSYVGEVSKAMDKKKVLVKVH 100
>Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical
protein T07C4.6 protein.
Length = 292
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 734 FP*LLSEQSPVEFTFV*FPFLS 669
FP +LSE PV+F F FPFLS
Sbjct: 241 FPHMLSENLPVQFPFA-FPFLS 261
>AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box
transcription factor TBX-9 protein.
Length = 292
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 734 FP*LLSEQSPVEFTFV*FPFLS 669
FP +LSE PV+F F FPFLS
Sbjct: 241 FPHMLSENLPVQFPFA-FPFLS 261
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 348 KRKLKSQDGYSTTWFAYPIMESFLGG---KYECDNTNQLEHEFYTNDNQFNTQTLLSEAS 518
++K KS + ST F+Y E GG KY D ++ E D + T +
Sbjct: 158 EKKKKSAEKKSTIGFSYDDSEVVKGGKDEKYNSDGDSEEEEMDDMQDLDVDLDTSILNPE 217
Query: 519 TPRTANPTDKK 551
T RT N + ++
Sbjct: 218 TQRTVNKSGEE 228
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 7.8
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 477 DNQFNTQTLLSEASTPRTANPTDKKS--NKQTCQVNNTKTKNFDNTELKYAKKQMDDAVT 650
D N+ L AS + + S +++T N K + + +L A + DDA+
Sbjct: 1309 DETLNSNLLKKNASLDMQLSELTEASEEDRRTRATLNNKIRQLEE-DLAVAVEARDDALD 1367
Query: 651 YLKNVAAQKRESDECELYGRLLAKKLRKLDEHQRDVAMHEI 773
AQ++ E + LLA+ +KLDE R+V M E+
Sbjct: 1368 ------AQEKIEKEVKEVKSLLAEARKKLDEENREV-MEEL 1401
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 7.8
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 477 DNQFNTQTLLSEASTPRTANPTDKKS--NKQTCQVNNTKTKNFDNTELKYAKKQMDDAVT 650
D N+ L AS + + S +++T N K + + +L A + DDA+
Sbjct: 1309 DETLNSNLLKKNASLDMQLSELTEASEEDRRTRATLNNKIRQLEE-DLAVAVEARDDALD 1367
Query: 651 YLKNVAAQKRESDECELYGRLLAKKLRKLDEHQRDVAMHEI 773
AQ++ E + LLA+ +KLDE R+V M E+
Sbjct: 1368 ------AQEKIEKEVKEVKSLLAEARKKLDEENREV-MEEL 1401
>U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical
protein C10G8.8b protein.
Length = 295
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 417 LGGKYECDNTNQLEHEFYTNDN-QFNTQTLLSEASTPRTANPTDKKSNKQTCQVNNTKTK 593
LG + E + + E E D+ Q Q +E TP+ + P ++ + + T+
Sbjct: 198 LGEQEELEEEPKSEDEVDVEDHDQEECQDQRTETQTPKNSEPAQEEETRAEESKDKENTE 257
Query: 594 NFDNTELKYAKKQMDDA 644
N D T+ + ++ +D+
Sbjct: 258 NSDETKEESSEDVKEDS 274
>U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical
protein C10G8.8a protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 417 LGGKYECDNTNQLEHEFYTNDN-QFNTQTLLSEASTPRTANPTDKKSNKQTCQVNNTKTK 593
LG + E + + E E D+ Q Q +E TP+ + P ++ + + T+
Sbjct: 288 LGEQEELEEEPKSEDEVDVEDHDQEECQDQRTETQTPKNSEPAQEEETRAEESKDKENTE 347
Query: 594 NFDNTELKYAKKQMDDA 644
N D T+ + ++ +D+
Sbjct: 348 NSDETKEESSEDVKEDS 364
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 28.3 bits (60), Expect = 7.8
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 477 DNQFNTQTLLSEASTPRTANPTDKKS--NKQTCQVNNTKTKNFDNTELKYAKKQMDDAVT 650
D N+ L AS + + S +++T N K + + +L A + DDA+
Sbjct: 1309 DETLNSNLLKKNASLDMQLSELTEASEEDRRTRATLNNKIRQLEE-DLAVAVEARDDALD 1367
Query: 651 YLKNVAAQKRESDECELYGRLLAKKLRKLDEHQRDVAMHEI 773
AQ++ E + LLA+ +KLDE R+V M E+
Sbjct: 1368 ------AQEKIEKEVKEVKSLLAEARKKLDEENREV-MEEL 1401
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 7.8
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +3
Query: 450 QLEHEFYTNDNQFNTQTLL-SEASTPRTANPTDKKSNKQTCQVNNTKTKNFDNTELKYAK 626
QL+ D++ Q+L S P + + KS K + ++ + N +K K
Sbjct: 10840 QLDKSQEVEDDKMTIQSLKKSIKKKPESREVSGGKSEKSKEKESDEMSIQQLNKSVK--K 10897
Query: 627 KQMDDAVTYLKNVAAQKRESDECELYGRLLAKKLRKLD 740
K ++AVT K+ +Q++ESD+ + + L K ++K D
Sbjct: 10898 KPENEAVTQGKSGKSQEQESDKMSI--QALNKSMKKKD 10933
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 7.8
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +3
Query: 450 QLEHEFYTNDNQFNTQTLL-SEASTPRTANPTDKKSNKQTCQVNNTKTKNFDNTELKYAK 626
QL+ D++ Q+L S P + + KS K + ++ + N +K K
Sbjct: 10840 QLDKSQEVEDDKMTIQSLKKSIKKKPESREVSGGKSEKSKEKESDEMSIQQLNKSVK--K 10897
Query: 627 KQMDDAVTYLKNVAAQKRESDECELYGRLLAKKLRKLD 740
K ++AVT K+ +Q++ESD+ + + L K ++K D
Sbjct: 10898 KPENEAVTQGKSGKSQEQESDKMSI--QALNKSMKKKD 10933
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,945
Number of Sequences: 27780
Number of extensions: 352473
Number of successful extensions: 1331
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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